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Original article
Bacillus subtilis with endocellulase and exocellulase activities isolated in the thermophilic phase from composting with coffee residues
Bacillus subtilis con actividades de endocelulasa y exocelulasa aislado en la fase termofílica del compostaje con residuos de café
Yadira Siu-Rodasa, María de los Angeles Calixto-Romoa,
Corresponding author
, Karina Guillén-Navarroa, José E. Sáncheza, Jesús Alejandro Zamora-Briseñoa, Lorena Amaya-Delgadob
a El Colegio de la Frontera Sur (ECOSUR), Carretera Antiguo Aeropuerto Km. 2.5, col. Centro, C.P. 30700 Tapachula, Chiapas, Mexico
b Centro de Investigación y Asistencia en Tecnología y Diseño del Estado de Jalisco (CIATEJ), Camino del Arenero 1227, El Bajío del Arenal, C.P. 45019 Zapopan, Jalisco, Mexico
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One option for this would be bacterial cellulases&#44; which form synergistic multi-enzymatic complexes with increased activity<a class="elsevierStyleCrossRef" href="#bib0490"><span class="elsevierStyleSup">43</span></a>&#46; Moreover&#44; bacterial cellulases are active at extreme pH&#44; salinity and temperature conditions&#44; such as those encountered in composting processes<a class="elsevierStyleCrossRef" href="#bib0480"><span class="elsevierStyleSup">41</span></a>&#44; including high temperature environments where the presence of thermostable enzymes increase bioconversion rates<a class="elsevierStyleCrossRef" href="#bib0280"><span class="elsevierStyleSup">1</span></a>&#46; The bacterial species that dominate the thermophilic phase of compost processes belong to the genus <span class="elsevierStyleItalic">Bacillus</span>&#46; They play an important role in the degradation of complex substrates&#44; such as cellulose<a class="elsevierStyleCrossRef" href="#bib0325"><span class="elsevierStyleSup">10</span></a>&#46; There are several reports of bacterial cellulases with activities at extreme pH &#40;acidic or basic&#41;&#44; high salinity and temperatures<a class="elsevierStyleCrossRefs" href="#bib0290"><span class="elsevierStyleSup">3&#44;6&#44;17&#44;18&#44;24</span></a>&#46; These cellulases have been isolated from several environments&#44; such as termite guts<a class="elsevierStyleCrossRef" href="#bib0300"><span class="elsevierStyleSup">5</span></a>&#44; soil contaminated with paper industry residues<a class="elsevierStyleCrossRef" href="#bib0460"><span class="elsevierStyleSup">37</span></a>&#44; mangrove soil<a class="elsevierStyleCrossRef" href="#bib0310"><span class="elsevierStyleSup">7</span></a>&#44; degraded lignocellulosic biomass<a class="elsevierStyleCrossRef" href="#bib0520"><span class="elsevierStyleSup">49</span></a> and compost systems of kitchen and garden residues&#44; municipal solid wastes&#44; coffee residues and other agricultural residues<a class="elsevierStyleCrossRefs" href="#bib0355"><span class="elsevierStyleSup">16&#44;29&#44;34&#44;39&#44;42</span></a>&#46; These cellulosic residues are complex&#44; and each of them has characteristics conferring certain specificity&#46; Residues generated by the coffee industry also contain caffeine&#44; gallic acid&#44; caffeic acid&#44; chlorogenic acid&#44; and phenolic compounds<a class="elsevierStyleCrossRef" href="#bib0315"><span class="elsevierStyleSup">8</span></a> and have high acidity&#46; In the Soconusco region&#44; Chiapas&#44; Mexico&#44; large amounts of residues are generated in wet coffee processing &#40;approximately 7200<span class="elsevierStyleHsp" style=""></span>tons&#41;&#44; equivalent to 80&#37; of the annual coffee production of 9000<span class="elsevierStyleHsp" style=""></span>tons<a class="elsevierStyleCrossRef" href="#bib0505"><span class="elsevierStyleSup">46</span></a>&#46; These residues can be used to obtain fermentable substrates for the sustainable production of ethanol in coffee-producing zones&#46; Thermostable and acidophilic enzymes are required to take advantage of the cellulose of complex substrates&#44; such as those from this agricultural residue&#46; Therefore&#44; the aim of this study was to isolate&#44; select and characterize bacterial strains with cellulolytic capacity from the composting process with coffee residues&#46;</p></span><span id="sec0010" class="elsevierStyleSection elsevierViewall"><span class="elsevierStyleSectionTitle" id="sect0030">Materials and methods</span><span id="sec0015" class="elsevierStyleSection elsevierViewall"><span class="elsevierStyleSectionTitle" id="sect0035">Isolation of cellulolytic bacteria from composting with coffee residues</span><p id="par0010" class="elsevierStylePara elsevierViewall">Samples were obtained from the middle area of two composting piles&#44; each one containing coffee residues &#40;pulp and husk&#41; and cow manure at a ratio of 3&#58;1 &#40;v&#47;v&#41;&#46; The piles showed different characteristics&#58; pile 1&#58; nine days of composting&#44; with an internal temperature of 57<span class="elsevierStyleHsp" style=""></span>&#176;C and pH 5&#46;5&#59; and pile 2&#58; 36 days of composting with an internal temperature of 61<span class="elsevierStyleHsp" style=""></span>&#176;C and pH 9&#46;3&#46;</p><p id="par0015" class="elsevierStylePara elsevierViewall">For the isolation of cellulose degrading bacteria&#44; about 1<span class="elsevierStyleHsp" style=""></span>g of sample was added to 9<span class="elsevierStyleHsp" style=""></span>ml NaCl 0&#46;9&#37; and serially diluted and pour plate and spread plate techniques were done using mineral medium &#40;g&#47;l&#41;&#58; 1&#46;4 &#40;NH<span class="elsevierStyleInf">4</span>&#41;<span class="elsevierStyleInf">2</span>SO<span class="elsevierStyleInf">4</span>&#44; 2&#46;0 KH<span class="elsevierStyleInf">2</span>PO<span class="elsevierStyleInf">4</span>&#44; 0&#46;3 urea&#44; 0&#46;3 CaCl<span class="elsevierStyleInf">2</span>&#183;2H<span class="elsevierStyleInf">2</span>O&#44; 0&#46;3 MgSO<span class="elsevierStyleInf">4</span>&#183;4H<span class="elsevierStyleInf">2</span>O&#44; 0&#46;005 FeSO<span class="elsevierStyleInf">4</span>&#183;7H<span class="elsevierStyleInf">2</span>O&#44; 0&#46;0016 MnSO<span class="elsevierStyleInf">4</span>&#183;H<span class="elsevierStyleInf">2</span>O&#44; 0&#46;0014 ZnSO<span class="elsevierStyleInf">4</span>&#183;7H<span class="elsevierStyleInf">2</span>O&#44; and 0&#46;02 CoCl<span class="elsevierStyleInf">2</span>&#183;6H<span class="elsevierStyleInf">2</span>O with different cellulosic materials of carbon source&#58; &#40;1&#41; 10<span class="elsevierStyleHsp" style=""></span>g&#47;l carboxymethylcellulose &#40;CMC&#41;&#44; &#40;2&#41; 10<span class="elsevierStyleHsp" style=""></span>g&#47;l crystalline cellulose &#40;CC&#41;&#44; &#40;3&#41; 10<span class="elsevierStyleHsp" style=""></span>g&#47;l coffee waste &#40;PC&#41;&#44; &#40;4&#41; 9<span class="elsevierStyleHsp" style=""></span>g&#47;l CMC and 1<span class="elsevierStyleHsp" style=""></span>g&#47;l glucose &#40;CMCG&#41;&#44; &#40;5&#41; 9<span class="elsevierStyleHsp" style=""></span>g&#47;l CC and 1<span class="elsevierStyleHsp" style=""></span>g&#47;l glucose &#40;CCG&#41;&#44; &#40;6&#41; 9<span class="elsevierStyleHsp" style=""></span>g&#47;l PC and 1<span class="elsevierStyleHsp" style=""></span>g&#47;l glucose &#40;PCG&#41;&#44; &#40;7&#41; 10<span class="elsevierStyleHsp" style=""></span>g&#47;l CMC and 0&#46;25<span class="elsevierStyleHsp" style=""></span>g&#47;l yeast extract &#40;CMCYE&#41;&#44; &#40;8&#41; 10<span class="elsevierStyleHsp" style=""></span>g&#47;l CC and 0&#46;25<span class="elsevierStyleHsp" style=""></span>g&#47;l yeast extract &#40;CCYE&#41;&#44; and &#40;9&#41; 10<span class="elsevierStyleHsp" style=""></span>g&#47;l PC and 0&#46;25<span class="elsevierStyleHsp" style=""></span>g&#47;l yeast extract &#40;PCYE&#41;&#46; All culture media were supplemented with 0&#46;1&#37; Congo red and 2&#37; agar&#46; The colonies that grew on the different culture media were isolated by streaking them on CMC media at pH 5&#46;9&#44; 7&#46;0&#44; and 9&#46;3 and CC at pH 5&#46;6 and 7&#46;0&#46; For the culture&#44; and the isolation&#44; the incubations were performed at 37<span class="elsevierStyleHsp" style=""></span>&#176;C for 5 days&#46;</p></span><span id="sec0020" class="elsevierStyleSection elsevierViewall"><span class="elsevierStyleSectionTitle" id="sect0040">Selection of cellulolytic bacterial strains</span><p id="par0020" class="elsevierStylePara elsevierViewall">The bacterial strains that managed to grow in the CMC and CC media were re-grown in the CMCYE&#44; pH 5&#46;9 and CCYE&#44; pH 5&#46;6 liquid media&#44; respectively&#44; and were incubated at 37<span class="elsevierStyleHsp" style=""></span>&#176;C for 120<span class="elsevierStyleHsp" style=""></span>h&#46; At different time intervals&#44; 200<span class="elsevierStyleHsp" style=""></span>&#956;l of the culture were sampled and evaluated to determine reducing sugar concentrations using dinitrosalicylic acid &#40;DNS&#41;<a class="elsevierStyleCrossRef" href="#bib0435"><span class="elsevierStyleSup">32</span></a> to confirm cellulolytic capacity&#46; A standard glucose curve was used to calculate the sugar concentrations&#46; The strains were also inoculated in mineral media &#40;g&#47;l&#41;&#58; 1&#46;0 KH<span class="elsevierStyleInf">2</span>PO<span class="elsevierStyleInf">4</span>&#44; 0&#46;5 MgSO<span class="elsevierStyleInf">4</span>&#183;7H<span class="elsevierStyleInf">2</span>O&#44; 0&#46;01 FeSO<span class="elsevierStyleInf">4</span>&#183;7H<span class="elsevierStyleInf">2</span>O&#44; 0&#46;01 MnSO<span class="elsevierStyleInf">4</span>&#183;H<span class="elsevierStyleInf">2</span>O&#44; 0&#46;3 NH<span class="elsevierStyleInf">4</span>NO<span class="elsevierStyleInf">3</span> and 1&#37; CMC at pH 5&#46;6&#44; 7&#46;0&#44; and 9&#46;3&#46; They were incubated at 37<span class="elsevierStyleHsp" style=""></span>&#176;C for 24<span class="elsevierStyleHsp" style=""></span>h&#46; The plates were stained with 0&#46;5&#37; Congo red for 15<span class="elsevierStyleHsp" style=""></span>min&#44; washed with 1<span class="elsevierStyleHsp" style=""></span>M NaCl and left to rest for 10<span class="elsevierStyleHsp" style=""></span>min<a class="elsevierStyleCrossRef" href="#bib0295"><span class="elsevierStyleSup">4</span></a>&#46; Hydrolysis halo diameters were manually measured&#44; and the strains with larger halos were selected&#46;</p></span><span id="sec0025" class="elsevierStyleSection elsevierViewall"><span class="elsevierStyleSectionTitle" id="sect0045">Identification of bacterial strains</span><p id="par0025" class="elsevierStylePara elsevierViewall">Strains with the highest cellulolytic activity were identified using biochemical and morphological analyses according to the Bergey&#39;s Manual of Systematic Bacteriology<a class="elsevierStyleCrossRef" href="#bib0500"><span class="elsevierStyleSup">45</span></a> by scanning electron microscopy with a TOPCON SM-510 microscope and by analyzing 16S rDNA regions&#46;</p><p id="par0030" class="elsevierStylePara elsevierViewall">For the amplification of the ribosomal regions&#44; the extraction of genomic DNA was performed for the bacterial strains using the phenol-chloroform technique<a class="elsevierStyleCrossRef" href="#bib0495"><span class="elsevierStyleSup">44</span></a>&#46; For PCR&#44; universal primers fD1 &#40;5&#8242;-AGAGTTTGATCCTGGCTCAG-3&#8242;&#41; and rD1 &#40;5&#8242;-AAGGAGGTGATCCAGCC-3&#8242;&#41;<a class="elsevierStyleCrossRef" href="#bib0530"><span class="elsevierStyleSup">51</span></a> and <span class="elsevierStyleItalic">Taq</span> polymerase EPO402 &#40;Fermentas&#41; were used&#46; The reaction was performed in a T100 thermocycler &#40;BIORAD&#41; under the following conditions&#58; 95<span class="elsevierStyleHsp" style=""></span>&#176;C for 3&#46;5<span class="elsevierStyleHsp" style=""></span>min&#59; followed by 30 cycles at 95<span class="elsevierStyleHsp" style=""></span>&#176;C for 30<span class="elsevierStyleHsp" style=""></span>s&#44; 53<span class="elsevierStyleHsp" style=""></span>&#176;C for 30<span class="elsevierStyleHsp" style=""></span>s&#44; and 72<span class="elsevierStyleHsp" style=""></span>&#176;C for 1&#46;5<span class="elsevierStyleHsp" style=""></span>min&#44; with a final extension of 72<span class="elsevierStyleHsp" style=""></span>&#176;C for 10<span class="elsevierStyleHsp" style=""></span>min&#46; The products obtained were purified with Spin Quantum PCR Kleen columns &#40;BIORAD&#41; and sequenced in a capillary sequencer &#40;Macrogen&#44; Inc&#46;&#44; Korea&#41;&#46; Sequence analyses were performed with MEGA 6&#46;06<a class="elsevierStyleCrossRef" href="#bib0515"><span class="elsevierStyleSup">48</span></a> and with the NCBI Basic Local Alignment Search Tool &#40;BLAST&#41; algorithm&#46; A redundancy analysis of previously aligned sequences with SINA<a class="elsevierStyleCrossRef" href="#bib0455"><span class="elsevierStyleSup">36</span></a> was performed using DAMBE 5&#46;2<a class="elsevierStyleCrossRef" href="#bib0535"><span class="elsevierStyleSup">52</span></a>&#46; Phylogenetic analyses were performed using the maximum likelihood statistical method with the Jukes&#8211;Cantor model<a class="elsevierStyleCrossRef" href="#bib0370"><span class="elsevierStyleSup">19</span></a> using MEGA7<a class="elsevierStyleCrossRef" href="#bib0380"><span class="elsevierStyleSup">21</span></a>&#46; The phylogenetic tree was built based on the sequences of microorganisms reported in the LPSN bacterio&#46;net<a class="elsevierStyleCrossRef" href="#bib0405"><span class="elsevierStyleSup">26</span></a> reference database&#46; Confidence was evaluated using 1000 bootstrap replicates&#46;</p></span><span id="sec0030" class="elsevierStyleSection elsevierViewall"><span class="elsevierStyleSectionTitle" id="sect0050">Cellulase production</span><p id="par0035" class="elsevierStylePara elsevierViewall">Cultures were performed under the same selection conditions&#44; strains were inoculated in triplicate in 250-ml Erlenmeyer flasks with 75<span class="elsevierStyleHsp" style=""></span>ml of CMCYE&#44; pH 5&#46;9&#44; and CCYE&#44; pH 5&#46;65&#44; and incubated at 37<span class="elsevierStyleHsp" style=""></span>&#176;C at 200<span class="elsevierStyleHsp" style=""></span>rpm&#46; Every 24<span class="elsevierStyleHsp" style=""></span>h&#44; 5<span class="elsevierStyleHsp" style=""></span>ml of the culture was taken and collected in 15<span class="elsevierStyleHsp" style=""></span>ml conical tubes&#46; They were then centrifuged at 10000<span class="elsevierStyleHsp" style=""></span>rpm for 3<span class="elsevierStyleHsp" style=""></span>min at 4<span class="elsevierStyleHsp" style=""></span>&#176;C to separate the biomass&#46; Protease inhibitors &#40;200<span class="elsevierStyleHsp" style=""></span>&#956;l cocktail Complete<span class="elsevierStyleSup">TM</span> ultra tablets&#44; EDTA free and 50<span class="elsevierStyleHsp" style=""></span>&#956;l of 100<span class="elsevierStyleHsp" style=""></span>mM PMSF&#41; were subsequently added to the supernatant &#40;protein extract&#41;&#46; This protein extract was stored at &#8722;20<span class="elsevierStyleHsp" style=""></span>&#176;C until further analysis&#46;</p></span><span id="sec0035" class="elsevierStyleSection elsevierViewall"><span class="elsevierStyleSectionTitle" id="sect0055">SDS-PAGE&#44; Native-PAGE and zymograms</span><p id="par0040" class="elsevierStylePara elsevierViewall">For the analysis of proteins secreted by the bacterial strains&#44; polyacrylamide gel electrophoresis under denaturing &#40;SDS-PAGE&#41; and native &#40;Native-PAGE&#41; conditions were performed with zymograms to determine cellulase activity<a class="elsevierStyleCrossRef" href="#bib0385"><span class="elsevierStyleSup">22</span></a>&#46; For the SDS-PAGE&#44; the protein extracts were concentrated by exposure to 99<span class="elsevierStyleHsp" style=""></span>&#176;C for 12<span class="elsevierStyleHsp" style=""></span>min and then to &#8722;20<span class="elsevierStyleHsp" style=""></span>&#176;C for 16<span class="elsevierStyleHsp" style=""></span>h&#46; The precipitated proteins were resuspended in a 0&#46;1&#37; SDS&#47;5&#46;6<span class="elsevierStyleHsp" style=""></span>M urea&#47;50<span class="elsevierStyleHsp" style=""></span>mMTris solution&#46; For Native-PAGE&#44; the electrophoresis was performed with crude protein extracts&#46;</p><p id="par0045" class="elsevierStylePara elsevierViewall">Loading volumes were established according to the amount of proteins&#44; which were quantified by the Bradford technique<a class="elsevierStyleCrossRef" href="#bib0335"><span class="elsevierStyleSup">12</span></a> using bovine serum albumin &#40;BSA&#41; as a standard&#46; To assess the total protein profile&#44; gels were stained with Coomassie blue R-250 for 16<span class="elsevierStyleHsp" style=""></span>h&#46;</p><p id="par0050" class="elsevierStylePara elsevierViewall">For the zymograms&#44; both SDS-PAGE and Native-PAGE gels with 0&#46;1&#37; CMC were incubated for 16<span class="elsevierStyleHsp" style=""></span>h with different buffer solutions &#40;0&#46;1<span class="elsevierStyleHsp" style=""></span>M citrate buffer at pH 4&#46;8&#44; 0&#46;2<span class="elsevierStyleHsp" style=""></span>M acetate buffer at pH 5&#46;8&#44; 1&#215; PBS at pH 7&#46;4 and 0&#46;025<span class="elsevierStyleHsp" style=""></span>M borate buffer at pH 9&#46;3&#41; at 25<span class="elsevierStyleHsp" style=""></span>&#176;C with mild agitation&#46; The gels were stained with 0&#46;5&#37; Congo red and washed with 1<span class="elsevierStyleHsp" style=""></span>M NaCl until bands appeared to reveal the cellulase activity<a class="elsevierStyleCrossRef" href="#bib0465"><span class="elsevierStyleSup">38</span></a>&#46;</p></span><span id="sec0040" class="elsevierStyleSection elsevierViewall"><span class="elsevierStyleSectionTitle" id="sect0060">Enzymatic activity with CMC and CC at different pH and temperature values</span><p id="par0055" class="elsevierStylePara elsevierViewall">Cellulase activity was defined as the amount of enzyme required to generate 1<span class="elsevierStyleHsp" style=""></span>&#956;mol of reducing sugars in one minute and was evaluated at 37<span class="elsevierStyleHsp" style=""></span>&#176;C and 60<span class="elsevierStyleHsp" style=""></span>&#176;C with 1&#37; CMC and 1&#37; CC in different buffers &#40;0&#46;1<span class="elsevierStyleHsp" style=""></span>M citrate buffer at pH 4&#46;8&#44; 0&#46;2<span class="elsevierStyleHsp" style=""></span>M acetate buffer at pH 5&#46;8&#44; 1&#215; PBS at pH 7&#46;4 and 0&#46;025<span class="elsevierStyleHsp" style=""></span>M borate at pH 9&#46;3&#41; after 30<span class="elsevierStyleHsp" style=""></span>min incubations&#46; The concentrations of reducing sugars were quantified using the DNS method&#46;<a class="elsevierStyleCrossRef" href="#bib0435"><span class="elsevierStyleSup">32</span></a></p></span></span><span id="sec0045" class="elsevierStyleSection elsevierViewall"><span class="elsevierStyleSectionTitle" id="sect0065">Results and discussion</span><span id="sec0050" class="elsevierStyleSection elsevierViewall"><span class="elsevierStyleSectionTitle" id="sect0070">Isolation and selection of cellulolytic bacteria from composting</span><p id="par0060" class="elsevierStylePara elsevierViewall">Twenty bacterial colonies were isolated from the samples obtained from the coffee residue composting piles&#59; two colonies grew in the media with CMC&#44; seven in the media with CC and seven in the media with both substrates&#46; Although all strains released reducing sugars&#44; the M-SRETCR strain released the highest concentration in both media&#58; 2&#46;4<span class="elsevierStyleHsp" style=""></span>mM after 24<span class="elsevierStyleHsp" style=""></span>h in CMC and 0&#46;98<span class="elsevierStyleHsp" style=""></span>mM after 5<span class="elsevierStyleHsp" style=""></span>h in CC &#40;<a class="elsevierStyleCrossRef" href="#fig0005">Fig&#46; 1</a>A&#41;&#46; The A-SRETCR strain produced sugars on the CMC media after 2<span class="elsevierStyleHsp" style=""></span>h&#59; the highest concentration &#40;2&#46;2<span class="elsevierStyleHsp" style=""></span>mM&#41; was observed after 99<span class="elsevierStyleHsp" style=""></span>h&#59; during the same 99<span class="elsevierStyleHsp" style=""></span>h period&#44; the M-SRETCR strain released 4&#46;3<span class="elsevierStyleHsp" style=""></span>mM&#46; The A-SRETCR&#44; M-SRETCR and N-SRETCR strains were the only bacteria that produced hydrolysis halos at pH 7&#46;0 with diameters of 20&#44; 18 and 15<span class="elsevierStyleHsp" style=""></span>mm&#44; respectively &#40;<a class="elsevierStyleCrossRef" href="#fig0005">Fig&#46; 1</a>B&#41;&#46; These sizes were greater than those reported by Acharya et al&#46;<a class="elsevierStyleCrossRef" href="#bib0285"><span class="elsevierStyleSup">2</span></a> for <span class="elsevierStyleItalic">B&#46; subtilis</span> isolated from compost piles&#46; However&#44; the halos reported by Acharya were produced after 8 days of incubation&#44; whereas those obtained in this study were observed after 24<span class="elsevierStyleHsp" style=""></span>h&#46; The A-SRETCR and M-SRETCR strains also showed halos at pH 5&#46;0 and 9&#46;0&#44; with diameters of 15 and 10<span class="elsevierStyleHsp" style=""></span>mm&#44; respectively&#46;</p><elsevierMultimedia ident="fig0005"></elsevierMultimedia></span><span id="sec0055" class="elsevierStyleSection elsevierViewall"><span class="elsevierStyleSectionTitle" id="sect0075">Identification of cellulolytic bacterial strains</span><p id="par0065" class="elsevierStylePara elsevierViewall">The A-SRETCR&#44; M-SRETCR and N-SRETCR strains were selected due to their higher cellulolytic activity and identified by physiological and biochemical tests as <span class="elsevierStyleItalic">B&#46; subtilis</span> strain type<a class="elsevierStyleCrossRefs" href="#bib0450"><span class="elsevierStyleSup">35&#44;45</span></a> &#40;<a class="elsevierStyleCrossRef" href="#tbl0005">Table 1</a>&#41;&#46; Nevertheless&#44; the strains showed some differences between them&#44; the A-SRETCR and M-SRETCR strains grew favorably at pH 5&#46;0&#44; 7&#46;0&#44; and 9&#46;0 and at 2&#46;0&#37;&#44; 5&#46;0&#37; and 7&#46;0&#37; NaCl&#44; whereas the N-SRETCR strain grew at pH 5&#46;0 and 7&#46;0 and only at 2&#46;0&#37; NaCl&#46; All three strains were rod-shaped when cultured in plates with CMC at pH 7&#46;0 &#40;<a class="elsevierStyleCrossRef" href="#fig0010">Figs&#46; 2</a>A&#44; C and D&#41;&#46; The A-SRETCR strain also showed a filamentous morphology &#40;<a class="elsevierStyleCrossRef" href="#fig0010">Fig&#46; 2</a>B&#41; in solid media at pH 5&#46;0 and 9&#46;0 and a pellet-shaped growth in liquid media at pH 5&#46;0 and 9&#46;0&#46; Earl et al&#46;<a class="elsevierStyleCrossRef" href="#bib0350"><span class="elsevierStyleSup">15</span></a> reported that <span class="elsevierStyleItalic">B subtilis</span> grew in a chain-like fashion when the spores germinated under reduced carbon feed conditions&#46; However&#44; Mo and Burkholder<a class="elsevierStyleCrossRef" href="#bib0440"><span class="elsevierStyleSup">33</span></a> showed that <span class="elsevierStyleItalic">B&#46; subtilis</span> had filamentous growth when the YneA protein &#40;a cell division inhibitor&#41; was overexpressed as a response to environmental stress and DNA damage&#46;</p><elsevierMultimedia ident="tbl0005"></elsevierMultimedia><elsevierMultimedia ident="fig0010"></elsevierMultimedia><p id="par0070" class="elsevierStylePara elsevierViewall">The analysis of partial 16S rDNA sequences revealed that the A-SRETCR and M-SRETCR strains have 99&#37; similarity to <span class="elsevierStyleItalic">B&#46; subtilis</span> subs&#46; <span class="elsevierStyleItalic">subtilis</span> CU1050&#44; whereas the N-SRETCR strain showed 99&#37; similarity with <span class="elsevierStyleItalic">B&#46; subtilis</span> I5-8&#46; The identified strains were registered in GenBank under accession numbers KU736839&#46;1 <span class="elsevierStyleItalic">B&#46; subtilis</span> A-SRETCR&#44; KU736840&#46;1 <span class="elsevierStyleItalic">B&#46; subtilis</span> M-SRETCR and KU736841&#46;1 <span class="elsevierStyleItalic">B&#46; subtilis</span> N-SRETCR&#46; The phylogenetic analysis redundancy test &#40;<a class="elsevierStyleCrossRef" href="#fig0010">Fig&#46; 2</a>E&#41; discarded the sequences of some <span class="elsevierStyleItalic">B&#46; subtilis</span> reference sub-strains reported in the LPSN bacterio&#46;net 2015 database but did not remove those of A-SRETCR&#44; M-SRETCR and N-SRETCR&#44; which suggested that although the three stains showed high similarity to <span class="elsevierStyleItalic">B&#46; subtilis</span>&#44; they were sufficiently different among each other and from the reference strains&#46; Although they are related&#44; <span class="elsevierStyleItalic">B&#46; subtilis</span> variants are sub-classified into sub-species because they have some differences<a class="elsevierStyleCrossRef" href="#bib0350"><span class="elsevierStyleSup">15</span></a>&#46; Likewise&#44; Rooney et al&#46;<a class="elsevierStyleCrossRef" href="#bib0475"><span class="elsevierStyleSup">40</span></a> observed that <span class="elsevierStyleItalic">B&#46; subtilis</span> sub-species are tightly related&#59; their clear differentiation had not been possible based on phenotypic or phylogenetic characteristics and because the 16S rDNA is very conserved&#46;</p><p id="par0075" class="elsevierStylePara elsevierViewall"><span class="elsevierStyleItalic">B&#46; subtilis</span> is known for its cellulolytic capacity and for its ability to develop in different environments<a class="elsevierStyleCrossRefs" href="#bib0345"><span class="elsevierStyleSup">14&#44;15&#44;37&#44;42&#44;55</span></a>&#46; In this study&#44; <span class="elsevierStyleItalic">B&#46; subtilis</span> strains A-SRETCR and M-SRETCR were isolated from composting piles with coffee residues in the thermophilic stage &#40;61<span class="elsevierStyleHsp" style=""></span>&#176;C&#41; at pH 9&#46;3&#44; whereas strain N-SRETCR was isolated from a composting pile at 57<span class="elsevierStyleHsp" style=""></span>&#176;C and pH 5&#46;5&#46; Acharya et al&#46;<a class="elsevierStyleCrossRef" href="#bib0285"><span class="elsevierStyleSup">2</span></a> reported the thermophilic strain of <span class="elsevierStyleItalic">B&#46; subtilis</span> as having greater cellulolytic potential based on the diameter of the hydrolysis halos&#46;</p></span><span id="sec0060" class="elsevierStyleSection elsevierViewall"><span class="elsevierStyleSectionTitle" id="sect0080">SDS-PAGE&#44; Native-PAGE and zymogram analyses</span><p id="par0080" class="elsevierStylePara elsevierViewall">In the profile of total proteins precipitated using thermal shock and separated by SDS-PAGE &#40;<a class="elsevierStyleCrossRef" href="#fig0015">Fig&#46; 3</a>A&#41;&#44; the differences in the proteins secreted by all three strains can be observed&#46; Their zymograms showed endocellulase activity &#40;<a class="elsevierStyleCrossRef" href="#fig0015">Fig&#46; 3</a>B&#41; at pH 7&#46;4 and 25<span class="elsevierStyleHsp" style=""></span>&#176;C&#46; The intensity of the bands showed that the cellulase secreted by <span class="elsevierStyleItalic">B&#46; subtilis</span> A-SRETCR showed higher activity&#46; For all three strains&#44; the zymograms revealed an endocellulase with an approximate molecular weight of 46<span class="elsevierStyleHsp" style=""></span>kDa &#40;<a class="elsevierStyleCrossRef" href="#fig0015">Fig&#46; 3</a>B&#41;&#59; A-SRETCR showed a hydrolysis band of 55<span class="elsevierStyleHsp" style=""></span>kDa&#44; similar to the one reported for different <span class="elsevierStyleItalic">B&#46; subtilis</span> strains of 55 kDa<a class="elsevierStyleCrossRefs" href="#bib0390"><span class="elsevierStyleSup">23&#44;28</span></a> and 56<span class="elsevierStyleHsp" style=""></span>kDa<a class="elsevierStyleCrossRef" href="#bib0330"><span class="elsevierStyleSup">11</span></a>&#46; Additionally&#44; after 24<span class="elsevierStyleHsp" style=""></span>h &#40;<a class="elsevierStyleCrossRef" href="#fig0020">Fig&#46; 4</a>&#41;&#44; <span class="elsevierStyleItalic">B&#46; subtilis</span> A-SRETCR showed hydrolysis bands corresponding to 35<span class="elsevierStyleHsp" style=""></span>kDa&#44; and M-SRETCR showed one band at 176<span class="elsevierStyleHsp" style=""></span>kDa&#46; The same number of bands was observed in SDS-PAGE and Native-PAGE&#44; confirming that the extracts contained at least two endocellulases&#46;</p><elsevierMultimedia ident="fig0015"></elsevierMultimedia><elsevierMultimedia ident="fig0020"></elsevierMultimedia><p id="par0085" class="elsevierStylePara elsevierViewall">Several studies have reported single bands with endocellulase activity for different <span class="elsevierStyleItalic">B&#46; subtilis</span> strains with maximum activities at pH 4&#8211;6 and 50<span class="elsevierStyleHsp" style=""></span>&#176;C and 60<span class="elsevierStyleHsp" style=""></span>&#176;C<a class="elsevierStyleCrossRefs" href="#bib0390"><span class="elsevierStyleSup">23&#44;25&#44;28&#44;53&#8211;55</span></a>&#46; In this study&#44; higher intensity bands were observed at acidic pH &#40;4&#46;8 and 5&#46;8&#41; and lower intensity bands were observed at pH 7&#46;4 and 9&#46;3 at 25<span class="elsevierStyleHsp" style=""></span>&#176;C &#40;<a class="elsevierStyleCrossRef" href="#fig0025">Fig&#46; 5</a>A&#41; even after proteins were precipitated with drastic temperature changes &#40;99<span class="elsevierStyleHsp" style=""></span>&#176;C and &#8722;20<span class="elsevierStyleHsp" style=""></span>&#176;C&#41; and re-suspended with denaturing agents&#44; such as SDS and 5&#46;6<span class="elsevierStyleHsp" style=""></span>M urea&#46; This suggested that the cellulase extracts produced by <span class="elsevierStyleItalic">B&#46; subtilis</span> A-SRETCR and M-SRETCR could have applications in different industries due to their activity at different pH and because they had recovered activity after being exposed to thermal shock&#46; The use of cellulases at acidic pH has been suggested in the animal food industry and in the extraction and clarification of fruit juices<a class="elsevierStyleCrossRefs" href="#bib0320"><span class="elsevierStyleSup">9&#44;31&#44;47</span></a> as well as in the bleaching process of recycled paper<a class="elsevierStyleCrossRefs" href="#bib0285"><span class="elsevierStyleSup">2&#44;3&#44;50</span></a>&#46; Likewise&#44; these cellulases could be used in the hydrolysis of coffee residues having an acidity of up to pH 4&#46;5&#46;</p><elsevierMultimedia ident="fig0025"></elsevierMultimedia></span><span id="sec0065" class="elsevierStyleSection elsevierViewall"><span class="elsevierStyleSectionTitle" id="sect0085">Cellulolytic activity of the protein extracts</span><p id="par0090" class="elsevierStylePara elsevierViewall">The protein extracts of all three strains showed cellulolytic activity on CMC and CC &#40;<a class="elsevierStyleCrossRef" href="#fig0025">Fig&#46; 5</a>B&#41;&#44; suggesting the presence of endo and exocellulases because the activity of these enzymes is specific for the presence of these substrates<a class="elsevierStyleCrossRefs" href="#bib0410"><span class="elsevierStyleSup">27&#44;43</span></a>&#46; Although&#44; exocellulase activity was detected in all extracts&#44; higher activity &#40;0&#46;519<span class="elsevierStyleHsp" style=""></span>U&#47;ml&#41; was observed on CMC at 60<span class="elsevierStyleHsp" style=""></span>&#176;C&#44; which was similar to that reported for cellulases purified and characterized from <span class="elsevierStyleItalic">B&#46; subtilis</span> with enzymatic activities between 0&#46;200 and 0&#46;600<span class="elsevierStyleHsp" style=""></span>U&#47;ml<a class="elsevierStyleCrossRefs" href="#bib0390"><span class="elsevierStyleSup">23&#44;25&#44;28&#44;53&#8211;55</span></a>&#46; The extract of <span class="elsevierStyleItalic">B&#46; subtilis</span> A-SRETCR had the highest activity on CMC at 37<span class="elsevierStyleHsp" style=""></span>&#176;C and 60<span class="elsevierStyleHsp" style=""></span>&#176;C for all four evaluated pH values&#46; However&#44; the activity was higher with PBS&#44; which is a saline buffer containing Na<span class="elsevierStyleSup">&#43;</span> and K<span class="elsevierStyleSup">&#43;</span> ions&#46; These constituents could have acted as cofactors and increased the enzymatic activity&#46; Rawat and Tewari<a class="elsevierStyleCrossRef" href="#bib0460"><span class="elsevierStyleSup">37</span></a> and Zhu et al&#46;<a class="elsevierStyleCrossRef" href="#bib0550"><span class="elsevierStyleSup">55</span></a> showed increases in cellulase activity in the presence of these ions&#46;</p><p id="par0095" class="elsevierStylePara elsevierViewall">The highest exocellulase activity &#40;0&#46;254<span class="elsevierStyleHsp" style=""></span>U&#47;ml&#41; was observed in the extract of <span class="elsevierStyleItalic">B&#46; subtilis</span> N-SRETCR at pH 9&#46;3 and both temperatures and at pH 4&#46;8 and 37<span class="elsevierStyleHsp" style=""></span>&#176;C&#44; which could become the standard for future studies because no reports on exocellulases have identified optimal activity at this pH&#46; Deka et al&#46;<a class="elsevierStyleCrossRef" href="#bib0345"><span class="elsevierStyleSup">14</span></a> reported an endocellulase of <span class="elsevierStyleItalic">B&#46; subtilis</span> AS3 with optimal activity at pH 9&#46;2 and suggested its use for the production of alternative fuels&#44; such as bioethanol&#46;</p><p id="par0100" class="elsevierStylePara elsevierViewall">The isolation of microorganisms from composting piles in the thermophilic stage &#40;61<span class="elsevierStyleHsp" style=""></span>&#176;C&#41; allowed the identification of three <span class="elsevierStyleItalic">B&#46; subtilis</span> strains whose enzymatic extracts showed activity on CMC and crystal cellulose&#44; confirming the presence of endo and exocellulases&#46; The cellulases of these microorganisms possessed cellulolytic activity at acidic pH &#40;4&#46;8 and 5&#46;8&#41;&#46; These cellulases could be used in several industries&#44; such as in the preparation of animal foods&#44; fruit juice extraction and clarification&#44; and bleaching recycled paper&#46; Moreover&#44; cellulolytic activities were also observed at basic pH &#40;9&#46;3&#41;&#46; These cellulases could be used in the cellulose and paper industries and in detergents&#44; where enzymes able to tolerate basic pH are needed&#46; However&#44; it was observed that the cellulases of <span class="elsevierStyleItalic">B&#46; subtilis</span> A-SRETCR had higher activity at higher temperatures &#40;60<span class="elsevierStyleHsp" style=""></span>&#176;C&#41;&#46; The activity recovery of the extracts with cellulolytic activity after exposure to drastic temperature conditions and chaotropic agents indicated their potential applications in industry&#44; where typical operation conditions are known to cause enzyme denaturation due to mechanical damage and pH or temperature changes&#46; Finally&#44; the cellulolytic enzymes found in these microorganisms isolated from thermophilic conditions and from low acidity coffee processing residues could be used to take advantage of lignocellulosic residues generated in wet coffee processing&#46; In turn&#44; these complex residues could be used as fermentable substrates for the production of bioethanol&#46;</p></span></span><span id="sec0070" class="elsevierStyleSection elsevierViewall"><span class="elsevierStyleSectionTitle" id="sect0090">Ethical disclosures</span><span id="sec0075" class="elsevierStyleSection elsevierViewall"><span class="elsevierStyleSectionTitle" id="sect0095">Protection of human and animal subjects</span><p id="par0105" class="elsevierStylePara elsevierViewall">The authors declare that no experiments were performed on humans or animals for this study&#46;</p></span><span id="sec0080" class="elsevierStyleSection elsevierViewall"><span class="elsevierStyleSectionTitle" id="sect0100">Confidentiality of data</span><p id="par0110" class="elsevierStylePara elsevierViewall">The authors declare that no patient data appear in this article&#46;</p></span><span id="sec0085" class="elsevierStyleSection elsevierViewall"><span class="elsevierStyleSectionTitle" id="sect0105">Right to privacy and informed consent</span><p id="par0115" class="elsevierStylePara elsevierViewall">The authors declare that no patient data appear in this article&#46;</p></span></span><span id="sec0090" class="elsevierStyleSection elsevierViewall"><span class="elsevierStyleSectionTitle" id="sect0110">Conflict of interest</span><p id="par0120" class="elsevierStylePara elsevierViewall">The authors declare that they have no conflicts of interest&#46;</p></span></span>"
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          "identificador" => "xres1065494"
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        1 => array:2 [
          "identificador" => "xpalclavsec1013478"
          "titulo" => "Keywords"
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          "titulo" => "Resumen"
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          "titulo" => "Palabras clave"
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        4 => array:2 [
          "identificador" => "sec0005"
          "titulo" => "Introduction"
        ]
        5 => array:3 [
          "identificador" => "sec0010"
          "titulo" => "Materials and methods"
          "secciones" => array:6 [
            0 => array:2 [
              "identificador" => "sec0015"
              "titulo" => "Isolation of cellulolytic bacteria from composting with coffee residues"
            ]
            1 => array:2 [
              "identificador" => "sec0020"
              "titulo" => "Selection of cellulolytic bacterial strains"
            ]
            2 => array:2 [
              "identificador" => "sec0025"
              "titulo" => "Identification of bacterial strains"
            ]
            3 => array:2 [
              "identificador" => "sec0030"
              "titulo" => "Cellulase production"
            ]
            4 => array:2 [
              "identificador" => "sec0035"
              "titulo" => "SDS-PAGE&#44; Native-PAGE and zymograms"
            ]
            5 => array:2 [
              "identificador" => "sec0040"
              "titulo" => "Enzymatic activity with CMC and CC at different pH and temperature values"
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        6 => array:3 [
          "identificador" => "sec0045"
          "titulo" => "Results and discussion"
          "secciones" => array:4 [
            0 => array:2 [
              "identificador" => "sec0050"
              "titulo" => "Isolation and selection of cellulolytic bacteria from composting"
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            1 => array:2 [
              "identificador" => "sec0055"
              "titulo" => "Identification of cellulolytic bacterial strains"
            ]
            2 => array:2 [
              "identificador" => "sec0060"
              "titulo" => "SDS-PAGE&#44; Native-PAGE and zymogram analyses"
            ]
            3 => array:2 [
              "identificador" => "sec0065"
              "titulo" => "Cellulolytic activity of the protein extracts"
            ]
          ]
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        7 => array:3 [
          "identificador" => "sec0070"
          "titulo" => "Ethical disclosures"
          "secciones" => array:3 [
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              "identificador" => "sec0075"
              "titulo" => "Protection of human and animal subjects"
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            1 => array:2 [
              "identificador" => "sec0080"
              "titulo" => "Confidentiality of data"
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            2 => array:2 [
              "identificador" => "sec0085"
              "titulo" => "Right to privacy and informed consent"
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        8 => array:2 [
          "identificador" => "sec0090"
          "titulo" => "Conflict of interest"
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        9 => array:2 [
          "identificador" => "xack360551"
          "titulo" => "Acknowledgements"
        ]
        10 => array:1 [
          "titulo" => "References"
        ]
      ]
    ]
    "pdfFichero" => "main.pdf"
    "tienePdf" => true
    "fechaRecibido" => "2017-03-13"
    "fechaAceptado" => "2017-08-03"
    "PalabrasClave" => array:2 [
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        0 => array:4 [
          "clase" => "keyword"
          "titulo" => "Keywords"
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          "palabras" => array:4 [
            0 => "Bacteria"
            1 => "Composting"
            2 => "Coffee"
            3 => "Cellulases"
          ]
        ]
      ]
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        0 => array:4 [
          "clase" => "keyword"
          "titulo" => "Palabras clave"
          "identificador" => "xpalclavsec1013477"
          "palabras" => array:4 [
            0 => "Bacterias"
            1 => "Compostaje"
            2 => "Caf&#233;"
            3 => "Celulasas"
          ]
        ]
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        "titulo" => "Abstract"
        "resumen" => "<span id="abst0005" class="elsevierStyleSection elsevierViewall"><p id="spar0005" class="elsevierStyleSimplePara elsevierViewall">The goal of this study was to isolate&#44; select and characterize bacteria with cellulolytic activity from two different coffee residue composting piles&#44; one of which had an internal temperature of 57<span class="elsevierStyleHsp" style=""></span>&#176;C and pH 5&#46;5 and the other&#44; a temperature of 61<span class="elsevierStyleHsp" style=""></span>&#176;C&#44; and pH 9&#46;3&#46; Culture media were manipulated with carboxymethylcellulose and crystalline cellulose as sole carbon sources&#46; The enzyme activity was assessed by hydrolysis halo formation&#44; reducing sugar production and zymograms&#46; Three out of twenty isolated strains showed higher enzymatic activity and were identified as <span class="elsevierStyleItalic">Bacillus subtilis</span> according to their morphological&#44; physiological&#44; biochemical characteristics and based on the sequence analysis of 16S rDNA regions&#46; The enzymatic extracts of the three selected strains showed exocellulase and endocellulase maximum activity of 0&#46;254 and 0&#46;519 U&#47;ml&#44; respectively&#59; the activity of these enzymes was maintained even in acid pH &#40;4&#46;8&#41; and basic &#40;9&#46;3&#41; and at temperatures of up to 60<span class="elsevierStyleHsp" style=""></span>&#176;C&#46; The enzymatic activities observed in this study are within the highest reported for cellulose produced by bacteria of the genus <span class="elsevierStyleItalic">Bacillus</span>&#46; Endocellulase activity was shown in the zymograms from 24<span class="elsevierStyleHsp" style=""></span>h until 144<span class="elsevierStyleHsp" style=""></span>h of incubation&#46; Furthermore&#44; the pH effect on the endocellulase activity is reported for the first time by zymograms&#46; The findings in this study entail the possibility to use these enzymes in the procurement of fermentable substrates for the production of energy from the large amount of residues generated by the coffee agroindustry&#46;</p></span>"
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        "titulo" => "Resumen"
        "resumen" => "<span id="abst0010" class="elsevierStyleSection elsevierViewall"><p id="spar0010" class="elsevierStyleSimplePara elsevierViewall">El objetivo de este estudio fue aislar&#44; seleccionar y caracterizar bacterias con actividad celulol&#237;tica a partir de 2 diferentes pilas de compostaje de residuos de caf&#233;&#44; una con temperatura interna de 57<span class="elsevierStyleHsp" style=""></span>&#176;C y pH 5&#44;5&#59; la otra con temperatura interna de 61<span class="elsevierStyleHsp" style=""></span>&#176;C y pH 9&#44;3&#46; Se utilizaron medios de cultivo con carboximetilcelulosa y celulosa cristalina como &#250;nicas fuentes de carbono&#46; La actividad enzim&#225;tica fue evaluada por formaci&#243;n de halos de hidr&#243;lisis&#44; producci&#243;n de az&#250;cares reductores y zimogramas&#46; De 20 cepas aisladas&#44; 3 presentaron mayor actividad enzim&#225;tica y fueron identificadas como <span class="elsevierStyleItalic">Bacillus subtilis</span> sobre la base de sus caracter&#237;sticas morfol&#243;gicas&#44; fisiol&#243;gicas y bioqu&#237;micas y del an&#225;lisis de las secuencias de la regi&#243;n 16S del ADNr&#46; Los extractos enzim&#225;ticos de las 3 cepas seleccionadas presentaron actividad de exocelulasa y de endocelulasa&#44; con m&#225;ximos de 0&#44;254 y 0&#44;519<span class="elsevierStyleHsp" style=""></span>U&#47;ml&#44; respectivamente&#59; la actividad de estas enzimas se mantuvo incluso a pH &#225;cido &#40;4&#44;8&#41; o b&#225;sico &#40;9&#44;3&#41; y a temperaturas de hasta 60<span class="elsevierStyleHsp" style=""></span>&#176;C&#46; Las actividades enzim&#225;ticas halladas en este estudio se ubican dentro de las m&#225;s altas reportadas para celulasas producidas por bacterias del g&#233;nero <span class="elsevierStyleItalic">Bacillus</span>&#46; En los zimogramas se demostr&#243; actividad de endocelulasa desde las 24<span class="elsevierStyleHsp" style=""></span>h hasta las 144<span class="elsevierStyleHsp" style=""></span>h de incubaci&#243;n&#46; Asimismo&#44; se reporta por primera vez el efecto del pH sobre la actividad de endocelulasa observado por zimogramas&#46; Los resultados de este estudio abren la posibilidad de hacer uso de estas enzimas en la obtenci&#243;n de sustratos fermentables para la producci&#243;n de energ&#237;a a partir de los residuos generados en grandes cantidades por la agroindustria del caf&#233;&#46;</p></span>"
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          "en" => "<p id="spar0015" class="elsevierStyleSimplePara elsevierViewall">&#40;A&#41; Reducing sugars &#40;mM&#41;&#44; liberated from CMC and CC by bacterial strains isolated from the composting process with coffee residues&#46; &#40;B&#41; Hydrolysis halos formed by strains A-SRETCR &#40;20<span class="elsevierStyleHsp" style=""></span>mm&#41;&#44; M-SRETCR &#40;18<span class="elsevierStyleHsp" style=""></span>mm&#41; and N-SRETCR &#40;15<span class="elsevierStyleHsp" style=""></span>mm&#41; in mineral medium with 1&#37; CMC and pH 7&#46;0 at 24<span class="elsevierStyleHsp" style=""></span>h&#46;</p>"
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          "en" => "<p id="spar0020" class="elsevierStyleSimplePara elsevierViewall">Scanning electron micrography of bacterial strains isolated from composting of coffee residues&#46; &#40;A&#41; A-SRETCR cultured in medium with CMC pH 7&#46;0&#59; &#40;B&#41; A-SRETCR cultured in medium with CMC pH 5&#46;0&#59; &#40;C&#41; M-SRETCR and &#40;D&#41; N-SRETCR cultured in medium with CMC pH 7&#46;0&#46; &#40;E&#41; Phylogenetic analysis of 16S rDNA partial sequences of the strains of <span class="elsevierStyleItalic">B&#46; subtilis</span> A-SRETCR&#44; M-SRETCR and N-SRETCR isolated from composting of coffee residues and cow manure&#44; using <span class="elsevierStyleItalic">B&#46; subtilis</span> as reference sequences from bacterio&#46;net LPSN&#46; The phylogenetic tree was built with 1000 repetitions of bootstrap values by the method of maximum likelihood model Jukes-Cantor&#46;</p>"
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          "en" => "<p id="spar0025" class="elsevierStyleSimplePara elsevierViewall">&#40;A&#41; SDS-PAGE of protein extract from a 24<span class="elsevierStyleHsp" style=""></span>h culture in medium CMCYE pH 5&#46;95&#44; incubated at 37<span class="elsevierStyleHsp" style=""></span>&#176;C and 200<span class="elsevierStyleHsp" style=""></span>rpm&#44; precipitated with thermal shock and stained with Coomassie blue&#46; &#40;B&#41; Zymogram of protein extract&#44; incubated with 1&#215; PBS&#44; pH 7&#46;4 and stained with 0&#46;5&#37; Congo red&#46; Lane 1&#58; Marker Prestained SDS-PAGE Broad range&#59; lane 2&#58; N-SRETCR&#59; lane 3&#58; M-SRETCR&#59; and lane 4&#58; A-SRETCR&#46;</p>"
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          "en" => "<p id="spar0030" class="elsevierStyleSimplePara elsevierViewall">Kinetics of cellulolytic activity during 144<span class="elsevierStyleHsp" style=""></span>h of A-SRETCR &#40;A and C&#41; and M-SRETCR &#40;B and D&#41;&#46; A and B was separated in a SDS-PAGE&#44; C and D in Native-PAGE&#44; incubated in 1<span class="elsevierStyleHsp" style=""></span>M citrate buffer&#44; pH 4&#46;8 and 25<span class="elsevierStyleHsp" style=""></span>&#176;C&#46;</p>"
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          "en" => "<p id="spar0035" class="elsevierStyleSimplePara elsevierViewall">&#40;A&#41; Zymogram of the cellulase from a 24<span class="elsevierStyleHsp" style=""></span>h culture in medium CMCYE pH 5&#46;95&#44; at 37<span class="elsevierStyleHsp" style=""></span>&#176;C and 200<span class="elsevierStyleHsp" style=""></span>rpm&#46; Protein was precipitated with thermal shock and separated in SDS-PAGE with 0&#46;1&#37; CMC&#44; at 25<span class="elsevierStyleHsp" style=""></span>&#176;C&#44; during 24<span class="elsevierStyleHsp" style=""></span>h&#46; &#40;B&#41; Enzymatic activity from protein extract in CMC and CC incubated to 37 and 60<span class="elsevierStyleHsp" style=""></span>&#176;C&#46; Both were incubated at different pH values &#40;0&#46;1<span class="elsevierStyleHsp" style=""></span>M citrate buffer at pH 4&#46;8&#44; 0&#46;2<span class="elsevierStyleHsp" style=""></span>M acetate buffer at pH 5&#46;8&#44; 1&#215; PBS at pH 7&#46;4 and 0&#46;025<span class="elsevierStyleHsp" style=""></span>M borate buffer at pH 9&#46;3&#41;&#46; Lanes 1&#58; A-SRETCR&#59; lane 2&#58; M-SRETCR&#59; lane 3&#58; N-SRETCR&#46;</p>"
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          "leyenda" => "<p id="spar0045" class="elsevierStyleSimplePara elsevierViewall">&#40;&#177;&#41; Variable&#59; &#40;a&#41; CMC medium&#44; pH 9&#46;3&#59; &#40;b&#41; CMCYE medium&#44; pH 5&#46;95&#59; &#40;c&#41; CCG medium&#44; pH 5&#46;65&#59; &#40;d&#41; Branda et al&#46;<a class="elsevierStyleCrossRef" href="#bib0340"><span class="elsevierStyleSup">13</span></a>&#59; &#40;e&#41; Schleifer<a class="elsevierStyleCrossRef" href="#bib0500"><span class="elsevierStyleSup">45</span></a>&#46;</p>"
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                  <table border="0" frame="\n
                  \t\t\t\t\tvoid\n
                  \t\t\t\t" class=""><thead title="thead"><tr title="table-row"><th class="td" title="table-head  " align="left" valign="top" scope="col" style="border-bottom: 2px solid black">Characteristics&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</th><th class="td" title="table-head  " align="center" valign="top" scope="col" style="border-bottom: 2px solid black"><span class="elsevierStyleItalic">B&#46; subtilis</span> A-SRETCR&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</th><th class="td" title="table-head  " align="center" valign="top" scope="col" style="border-bottom: 2px solid black"><span class="elsevierStyleItalic">B&#46; subtilis</span> M-SRETCR&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</th><th class="td" title="table-head  " align="center" valign="top" scope="col" style="border-bottom: 2px solid black"><span class="elsevierStyleItalic">B&#46; subtilis</span> N-SRETCR&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</th><th class="td" title="table-head  " align="center" valign="top" scope="col" style="border-bottom: 2px solid black"><span class="elsevierStyleItalic">B&#46; subtilis</span><span class="elsevierStyleSup">e</span>&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</th></tr></thead><tbody title="tbody"><tr title="table-row"><td class="td-with-role" title="table-entry ; entry_with_role_rowhead " align="left" valign="top">Cell morphology&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">Filamentous and Rod-shaped&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">Rod-shaped&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">Rod-shaped&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">Rod-shaped&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td></tr><tr title="table-row"><td class="td-with-role" title="table-entry ; entry_with_role_rowhead " align="left" valign="top">Cell size &#40;&#956;m&#41;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">2&#46;23<span class="elsevierStyleHsp" style=""></span>&#215;<span class="elsevierStyleHsp" style=""></span>0&#46;89&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">1&#46;65<span class="elsevierStyleHsp" style=""></span>&#215;<span class="elsevierStyleHsp" style=""></span>0&#46;63&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">2&#46;34<span class="elsevierStyleHsp" style=""></span>&#215;<span class="elsevierStyleHsp" style=""></span>0&#46;66&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">2&#46;0&#8211;3&#46;0<span class="elsevierStyleHsp" style=""></span>&#215;<span class="elsevierStyleHsp" style=""></span>0&#46;7&#8211;0&#46;8&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td></tr><tr title="table-row"><td class="td-with-role" title="table-entry ; entry_with_role_rowhead " align="left" valign="top">Motility&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">&#43;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">&#43;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">&#43;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">&#43;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td></tr><tr title="table-row"><td class="td-with-role" title="table-entry ; entry_with_role_rowhead " align="left" valign="top">Gram reaction&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">&#43;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">&#43;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">&#43;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">&#43;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td></tr><tr title="table-row"><td class="td-with-role" title="table-entry ; entry_with_role_rowhead " align="left" valign="top">Endospores&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">&#8722;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">Central&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">Terminal&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">Central and subterminal&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td></tr><tr title="table-row"><td class="td-with-role" title="table-entry ; entry_with_role_rowhead " align="left" valign="top">Exopolysaccharides&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">&#8722;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">&#43;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">&#8722;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">&#43;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td></tr><tr title="table-row"><td class="td-with-role" title="table-entry ; entry_with_role_rowhead " align="left" valign="top">Colony morphology&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">Circular&#44; median&#44; white&#44; powdery texture<span class="elsevierStyleSup">a</span>&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">Irregular&#44; big&#44; bright red center&#44; flat<span class="elsevierStyleSup">b</span>&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">Irregular&#44; median&#44; black-bright red&#44; convex<span class="elsevierStyleSup">c</span>&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">Irregular with appearance of mixed culture&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td></tr><tr title="table-row"><td class="td-with-role" title="table-entry ; entry_with_role_rowhead " align="left" valign="top">Liquid medium&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">Pellets&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">Thin layer on the surface of the liquid&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">Cloudy&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">Thin layer on the surface of the liquid<span class="elsevierStyleSup">d</span>&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td></tr><tr title="table-row"><td class="td" title="table-entry  " colspan="5" align="left" valign="top"><span class="elsevierStyleVsp" style="height:0.5px"></span></td></tr><tr title="table-row"><td class="td" title="table-entry  " colspan="5" align="left" valign="top"><span class="elsevierStyleItalic">Growth</span></td></tr><tr title="table-row"><td class="td-with-role" title="table-entry ; entry_with_role_rowhead " align="left" valign="top"><span class="elsevierStyleHsp" style=""></span>Temperature &#40;&#176;C&#41;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">37&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">37&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">37&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">37&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td></tr><tr title="table-row"><td class="td-with-role" title="table-entry ; entry_with_role_rowhead " align="left" valign="top"><span class="elsevierStyleHsp" style=""></span>pH&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">5&#46;0&#44; 7&#46;0&#44; 9&#46;0&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">5&#46;0&#44; 7&#46;0&#44; 9&#46;0&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">5&#46;0&#44; 7&#46;0&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">5&#46;0&#44; 7&#46;0&#44; 9&#46;0&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td></tr><tr title="table-row"><td class="td-with-role" title="table-entry ; entry_with_role_rowhead " align="left" valign="top"><span class="elsevierStyleHsp" style=""></span>NaCl &#40;&#37;&#41;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">2&#46;0&#44; 5&#46;0&#44; 7&#46;0&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">2&#46;0&#44; 5&#46;0&#44; 7&#46;0&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">2&#46;0&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">2&#46;0&#44; 5&#46;0&#44; 7&#46;0&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td></tr><tr title="table-row"><td class="td" title="table-entry  " colspan="5" align="left" valign="top"><span class="elsevierStyleVsp" style="height:0.5px"></span></td></tr><tr title="table-row"><td class="td" title="table-entry  " colspan="5" align="left" valign="top"><span class="elsevierStyleItalic">Utilization of</span></td></tr><tr title="table-row"><td class="td-with-role" title="table-entry ; entry_with_role_rowhead " align="left" valign="top"><span class="elsevierStyleHsp" style=""></span>Citrate&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">&#8722;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">&#8722;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">&#8722;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">&#43;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td></tr><tr title="table-row"><td class="td-with-role" title="table-entry ; entry_with_role_rowhead " align="left" valign="top"><span class="elsevierStyleHsp" style=""></span>Crystalline cellulose&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">&#43;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">&#43;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">&#43;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">&#43;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td></tr><tr title="table-row"><td class="td-with-role" title="table-entry ; entry_with_role_rowhead " align="left" valign="top"><span class="elsevierStyleHsp" style=""></span>Carboxymethylcellulose&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">&#43;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">&#43;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">&#43;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">&#43;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td></tr><tr title="table-row"><td class="td" title="table-entry  " colspan="5" align="left" valign="top"><span class="elsevierStyleVsp" style="height:0.5px"></span></td></tr><tr title="table-row"><td class="td" title="table-entry  " colspan="5" align="left" valign="top"><span class="elsevierStyleItalic">Hydrolysis of</span></td></tr><tr title="table-row"><td class="td-with-role" title="table-entry ; entry_with_role_rowhead " align="left" valign="top"><span class="elsevierStyleHsp" style=""></span>Casein&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">&#43;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">&#43;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">&#43;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">&#43;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td></tr><tr title="table-row"><td class="td-with-role" title="table-entry ; entry_with_role_rowhead " align="left" valign="top"><span class="elsevierStyleHsp" style=""></span>Starch&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">&#43;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">&#43;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">&#8722;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">&#43;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td></tr><tr title="table-row"><td class="td-with-role" title="table-entry ; entry_with_role_rowhead " align="left" valign="top"><span class="elsevierStyleHsp" style=""></span>Gelatin&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">&#8722;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">&#8722;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">&#8722;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">&#43;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td></tr><tr title="table-row"><td class="td" title="table-entry  " colspan="5" align="left" valign="top"><span class="elsevierStyleVsp" style="height:0.5px"></span></td></tr><tr title="table-row"><td class="td" title="table-entry  " colspan="5" align="left" valign="top"><span class="elsevierStyleItalic">Acid from</span></td></tr><tr title="table-row"><td class="td-with-role" title="table-entry ; entry_with_role_rowhead " align="left" valign="top"><span class="elsevierStyleHsp" style=""></span>D-Glucose&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">&#43;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">&#43;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">&#43;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">&#43;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td></tr><tr title="table-row"><td class="td-with-role" title="table-entry ; entry_with_role_rowhead " align="left" valign="top"><span class="elsevierStyleHsp" style=""></span>D-Mannitol&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">&#8722;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">&#43;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">&#43;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">&#43;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td></tr><tr title="table-row"><td class="td-with-role" title="table-entry ; entry_with_role_rowhead " align="left" valign="top"><span class="elsevierStyleHsp" style=""></span>D-Xylose&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">&#43;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">&#43;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">&#43;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">&#43;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td></tr><tr title="table-row"><td class="td-with-role" title="table-entry ; entry_with_role_rowhead " align="left" valign="top"><span class="elsevierStyleHsp" style=""></span>Cellobiose&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">&#43;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">&#43;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">&#43;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">&#43;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td></tr><tr title="table-row"><td class="td-with-role" title="table-entry ; entry_with_role_rowhead " align="left" valign="top"><span class="elsevierStyleHsp" style=""></span>Urea&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">&#8722;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">&#8722;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">&#8722;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">&#8722;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td></tr><tr title="table-row"><td class="td-with-role" title="table-entry ; entry_with_role_rowhead " align="left" valign="top"><span class="elsevierStyleHsp" style=""></span>Catalase&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">&#43;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">&#43;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">&#8722;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">&#43;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td></tr><tr title="table-row"><td class="td-with-role" title="table-entry ; entry_with_role_rowhead " align="left" valign="top"><span class="elsevierStyleHsp" style=""></span>Oxidase&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">&#8722;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">&#8722;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">&#8722;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">&#177;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td></tr><tr title="table-row"><td class="td-with-role" title="table-entry ; entry_with_role_rowhead " align="left" valign="top"><span class="elsevierStyleHsp" style=""></span>Methyl red&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">&#8722;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">&#8722;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">&#8722;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">&#8722;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td></tr><tr title="table-row"><td class="td-with-role" title="table-entry ; entry_with_role_rowhead " align="left" valign="top"><span class="elsevierStyleHsp" style=""></span>Voges-Proskauer&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">&#8722;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">&#43;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">&#8722;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">&#43;&nbsp;\t\t\t\t\t\t\n
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