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Brief report
Comparison of the identification results of Candida species obtained by BD Phoenix™ and Maldi-TOF (Bruker Microflex LT Biotyper 3.1)
Comparación de los resultados de identificación de especies del género Candida obtenidos por BD Phoenix™ y Maldi-TOF (Bruker Microflex LT Biotyper 3.1)
Andrea P. Maruccoa,
Corresponding author
apmarucco27@gmail.com

Corresponding author.
, Patricia Minervinib, Gabriela V. Snitmanc, Adriana Sorged, Liliana I. Guelfande, Laura López Moralf, Integrantes de la Red de Micología CABA 1
a Hospital de Agudos Santojanni, CABA, Argentina
b Hospital Oftalmológico Santa Lucía, CABA, Argentina
c Hospital de Quemados, CABA, Argentina
d Instituto de Oncología Roffo, CABA, Argentina
e Hospital Fernández, CABA, Argentina
f Hospital Argerich, CABA, Argentina
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    "textoCompleto" => "<span class="elsevierStyleSections"><p id="par0005" class="elsevierStylePara elsevierViewall"><span class="elsevierStyleItalic">Candida albicans</span> continues to be the most frequent yeast isolated from clinical specimens&#46; However&#44; <span class="elsevierStyleItalic">Candida</span> species distribution has been changing during the last decades<a class="elsevierStyleCrossRefs" href="#bib0085"><span class="elsevierStyleSup">3&#44;5&#44;7</span></a> and it varies based on different factors including region&#44; patient&#39;s age group&#44; underlying disease&#44; prophylaxis used<a class="elsevierStyleCrossRefs" href="#bib0080"><span class="elsevierStyleSup">2&#44;7</span></a>&#46; <span class="elsevierStyleItalic">Candida glabrata</span> is an important emergent pathogen in Northern Europe&#44; the United States and Canada&#44; whereas <span class="elsevierStyleItalic">Candida parapsilosis</span> prevails in Southern Europe&#44; Asia and South America<a class="elsevierStyleCrossRef" href="#bib0095"><span class="elsevierStyleSup">5</span></a>&#46; In developed countries <span class="elsevierStyleItalic">C&#46; glabrata</span> ranks second&#44; followed by <span class="elsevierStyleItalic">C&#46; parapsilosis</span> and <span class="elsevierStyleItalic">Candida tropicalis</span><a class="elsevierStyleCrossRef" href="#bib0085"><span class="elsevierStyleSup">3</span></a>&#46; In Latin America&#44; <span class="elsevierStyleItalic">C&#46; parapsilosis</span> is found in the second place&#44; followed by <span class="elsevierStyleItalic">C&#46; tropicalis</span> and <span class="elsevierStyleItalic">C&#46; glabrata</span><a class="elsevierStyleCrossRef" href="#bib0105"><span class="elsevierStyleSup">7</span></a>&#46; In Argentina&#44; <span class="elsevierStyleItalic">C&#46; albicans</span> has been reported to be in the first place&#44; followed by <span class="elsevierStyleItalic">C&#46; parapsilosis</span> and then <span class="elsevierStyleItalic">C&#46; tropicalis</span> and <span class="elsevierStyleItalic">C&#46; glabrata</span>&#44; in studies performed by the National Mycology Network &#91;Instituto Nacional de Microbiolog&#237;a C&#46; Malbr&#225;n &#8211; Administraci&#243;n Nacional de Laboratorios e Institutos de Salud&#93; and the Buenos Aires City Mycology Network<a class="elsevierStyleCrossRefs" href="#bib0080"><span class="elsevierStyleSup">2&#44;6</span></a> thus confirming the data reported for Latin America<a class="elsevierStyleCrossRef" href="#bib0105"><span class="elsevierStyleSup">7</span></a>&#46;</p><p id="par0010" class="elsevierStylePara elsevierViewall">Among other factors&#44; species distribution varies depending on the different stages of the life course&#44; as it can be observed at the extremes of the age spectrum&#59; while <span class="elsevierStyleItalic">C&#46; albicans</span> and <span class="elsevierStyleItalic">C&#46; parapsilosis</span> prevail in newborns&#44; <span class="elsevierStyleItalic">C&#46; glabrata</span> predominates in patients over 60 years old<a class="elsevierStyleCrossRefs" href="#bib0080"><span class="elsevierStyleSup">2&#44;7</span></a>&#46;</p><p id="par0015" class="elsevierStylePara elsevierViewall">The importance of a definitive identification lies on the fact that certain <span class="elsevierStyleItalic">Candida</span> species can show or develop a reduced sensitivity to one or several antifungal drugs&#44; thus leading to crucial clinical consequences<a class="elsevierStyleCrossRefs" href="#bib0090"><span class="elsevierStyleSup">4&#44;12</span></a>&#46; A quick turnaround time for this test is critical in current clinical settings&#44; since a rapid diagnosis would enable the prescription of a specific antifungal treatment&#46; On the other hand&#44; identification down to species level allows for a better understanding of the epidemiology of each healthcare facility&#44; which is important when establishing an empirical therapy&#46;</p><p id="par0020" class="elsevierStylePara elsevierViewall">The conventional methodology is laborious and slow&#44; therefore&#44; commercial methods allowing a faster identification have been developed&#46; These methods&#44; such as API 20C AUX<span class="elsevierStyleSup">&#174;</span> and API ID 32C<span class="elsevierStyleSup">&#174;</span> &#40;bioM&#233;rieux&#44; France&#41;&#44; and RapID&#8482; Yeast Plus<span class="elsevierStyleSup">&#174;</span> &#40;Remel&#41;<a class="elsevierStyleCrossRefs" href="#bib0115"><span class="elsevierStyleSup">9&#44;14</span></a>&#44; are based on sugar assimilation and fermentation<a class="elsevierStyleCrossRef" href="#bib0075"><span class="elsevierStyleSup">1</span></a>&#46;</p><p id="par0025" class="elsevierStylePara elsevierViewall">During the last decades&#44; automated methods appropriate for microbiology laboratories have been developed&#46; Examples of these are Microscan WalkAway RYID<span class="elsevierStyleSup">&#174;</span> &#40;Rapid Yeast Identification&#41;&#44; Vitek YBC<span class="elsevierStyleSup">&#174;</span> &#40;Yeast Biochemical Card&#41;&#44; Vitek 2 ID-YST<span class="elsevierStyleSup">&#174;</span> and BD Phoenix&#8482; Yeast ID&#44; which can have yeasts identified within 4&#8211;48<span class="elsevierStyleHsp" style=""></span>h&#46; The automated microbiology system BD Phoenix&#8482; Yeast ID has been designed for the rapid identification of clinically relevant yeasts<a class="elsevierStyleCrossRef" href="#bib0115"><span class="elsevierStyleSup">9</span></a>&#46; The assays used in the panels are modifications of standard biochemical methods&#46; They include tests for fermentation&#44; oxidation&#44; degradation and hydrolysis of various substrates&#44; as well as single-carbon-source substrates&#44; both chromogenic and fluorogenic&#46; Use and degradation of specific substrates are detected by different indicator systems&#46; Acid production from carbohydrates is detected by a change in the phenol red indicator&#46; Chromogenic substrates contain p-nitrophenyl or p-nitroanilide compounds that produce a yellow color once its enzymatic hydrolysis has taken place&#46; Enzymatic hydrolysis of fluorogenic substrates results in the release of a product derived from the fluorescent substance coumarin&#46; Organisms using a single-carbon-source reduce a resazurin-based indicator<a class="elsevierStyleCrossRefs" href="#bib0120"><span class="elsevierStyleSup">10&#44;14</span></a>&#46;</p><p id="par0030" class="elsevierStylePara elsevierViewall">The purpose of this study was to compare the identification results obtained for different species of the genus <span class="elsevierStyleItalic">Candida</span> with either the BD Phoenix&#8482; Yeast ID automated method or the matrix-assisted laser desorption ionization&#8211;time of flight &#40;MALDI-TOF&#41; mass spectrometry &#40;MS&#41; method&#46;</p><p id="par0035" class="elsevierStylePara elsevierViewall">A collection of 192 strains of the genus <span class="elsevierStyleItalic">Candida</span>&#44; coming from various clinical specimens processed at member hospitals of the Buenos Aires City Mycology Network&#44; Argentina&#44; between 2009 and 2014&#44; was analyzed&#46; All strains were identified by conventional methods which included&#58; micromorphological study in corn-meal agar &#40;Oxoid&#44; UK&#41; with 1&#37; Tween 80&#59; chromogenic agar for yeasts &#40;CHROMagar&#8482; Candida&#44; Paris&#44; France&#41;&#59; API<span class="elsevierStyleSup">&#174;</span> ID 32C or API<span class="elsevierStyleSup">&#174;</span> 20C AUX &#40;bioM&#233;rieux&#44; Marcy l&#8217;Etoile&#44; France&#41; Biochemical tests were added to differentiate <span class="elsevierStyleItalic">C&#46; albicans</span> from <span class="elsevierStyleItalic">Candida dubliniensis</span>&#44; developmental capacity at different temperatures&#44; production of chlamydoconidia in different substrates and production of halo of opacity in media containing Tween 80 and CaCl<span class="elsevierStyleInf">2</span><a class="elsevierStyleCrossRef" href="#bib0110"><span class="elsevierStyleSup">8</span></a>&#46;</p><p id="par0040" class="elsevierStylePara elsevierViewall">Thirty-nine <span class="elsevierStyleItalic">C&#46; tropicalis</span>&#44; 34 <span class="elsevierStyleItalic">Candida guilliermondii</span>&#44; 31 <span class="elsevierStyleItalic">C&#46; albicans</span>&#44; 29 <span class="elsevierStyleItalic">C&#46; parapsilosis</span>&#44; 28 <span class="elsevierStyleItalic">C&#46; glabrata</span>&#44; 23 Candidakrusei&#44; 4 <span class="elsevierStyleItalic">C&#46; dubliniensis</span>&#44; 3 <span class="elsevierStyleItalic">Candida lusitaniae</span> and 1 <span class="elsevierStyleItalic">Candida lipolytica</span> were tested&#46; The strains were inoculated onto chromogenic culture media for yeasts &#40;CHROMagar&#8482; Candida&#41; in order to confirm purity&#46; Each isolate was subcultured in Sabouraud dextrose agar and incubated for 48<span class="elsevierStyleHsp" style=""></span>h&#44; at 35<span class="elsevierStyleHsp" style=""></span>&#176;C&#44; before using the BD Phoenix&#8482; Yeast ID panels as instructed by the manufacturer<a class="elsevierStyleCrossRef" href="#bib0115"><span class="elsevierStyleSup">9</span></a>&#46; As the Phoenix system does not report confidence values lower than 90&#37;&#44; results with scores &#62;90&#37; were considered to represent acceptable identifications&#46;</p><p id="par0045" class="elsevierStylePara elsevierViewall">Identification results were compared with those obtained by MALDI-TOF MS &#40;Bruker Microflex LT Biotyper 3&#46;1&#41;&#46; The MALDI ionization&#44; coupled to a TOF analyzer is a soft ionization technique used in mass spectrometry&#44; which allows the analysis of biomolecules and large organic molecules<a class="elsevierStyleCrossRefs" href="#bib0125"><span class="elsevierStyleSup">11&#44;13</span></a>&#46;</p><p id="par0050" class="elsevierStylePara elsevierViewall">MALDI-TOF MS was used as reference method&#44; together with genotyping identification in those strains yielding discrepant identification results&#46; For the molecular technique&#44; DNA extraction was performed&#44; followed by amplification of specific DNA portions with universal primers ITS1 &#40;5&#8242;-TCCGTAGGTGAACCTGCGG-3&#8242;&#41; and ITS4 &#40;5&#8242;-TCCTCCGCTTATTGATATGC-3&#8242;&#41; by PCR&#46; Amplification products were sequenced using the Sanger method&#46; The BLAST tool was used for identification and the criteria established were concordance &#62;97&#37; and coverage of at least 99&#37;&#46;</p><p id="par0055" class="elsevierStylePara elsevierViewall"><span class="elsevierStyleItalic">Candida krusei</span> ATCC 6258&#44; <span class="elsevierStyleItalic">C&#46; parapsilosis</span> ATCC 22019 and <span class="elsevierStyleItalic">C&#46; albicans</span> ATCC 64548 were used as control strains&#46;</p><p id="par0060" class="elsevierStylePara elsevierViewall">Among the different species studied&#44; concordance was variable and rates are detailed in <a class="elsevierStyleCrossRef" href="#tbl0005">Table 1</a>&#46; The general concordance index was 95&#37;&#46; While <span class="elsevierStyleItalic">C&#46; albicans</span> showed a concordance rate of 100&#37;&#44; the remaining species evidenced at least one discrepancy with the reference method&#46; Ten strains &#40;5&#37;&#41; were misidentified with the Yeast ID panels&#58; one <span class="elsevierStyleItalic">C&#46; tropicalis</span>&#44; two <span class="elsevierStyleItalic">C&#46; guilliermondii</span>&#44; one <span class="elsevierStyleItalic">C&#46; parapsilosis</span>&#44; one <span class="elsevierStyleItalic">C&#46; krusei</span>&#44; two <span class="elsevierStyleItalic">C&#46; dubliniensis</span>&#44; one <span class="elsevierStyleItalic">C&#46; lusitaniae</span> and one <span class="elsevierStyleItalic">C&#46; lipolytica</span>&#46; The low concordance rates obtained for the last three species mentioned above can be due to the low number of strains tested&#46; For the remaining species studied the index was &#8805;96&#37;&#46;</p><elsevierMultimedia ident="tbl0005"></elsevierMultimedia><p id="par0065" class="elsevierStylePara elsevierViewall">Detection turnaround times for each of the species are shown in <a class="elsevierStyleCrossRef" href="#tbl0010">Table 2</a>&#44; with a mean time of 8<span class="elsevierStyleHsp" style=""></span>h 22<span class="elsevierStyleHsp" style=""></span>min &#40;range 4<span class="elsevierStyleHsp" style=""></span>h 23<span class="elsevierStyleHsp" style=""></span>min&#8211;15<span class="elsevierStyleHsp" style=""></span>h 68<span class="elsevierStyleHsp" style=""></span>min&#41;&#46; MALDI-TOF MS differentiated two of the species of the <span class="elsevierStyleItalic">C&#46; parapsilosis</span> complex as <span class="elsevierStyleItalic">Candida orthopsilosis</span> and one species of the <span class="elsevierStyleItalic">C&#46; glabrata</span> complex as <span class="elsevierStyleItalic">Candida bracarensis</span>&#46; The BD Phoenix&#8482; system did not differentiate the cryptic species from those complexes&#44; because it is a method that identifies microorganisms based on the phenotypic features of yeasts&#46;</p><elsevierMultimedia ident="tbl0010"></elsevierMultimedia><p id="par0070" class="elsevierStylePara elsevierViewall">According to the results obtained&#44; we can conclude that the BD Phoenix&#8482; Yeast ID panel system is a reliable&#44; useful and rapid method for routine identification of the yeast species most frequently isolated from clinical specimens&#46; Since mass spectrometry methods such as MALDI-TOF are not available in most clinical microbiology laboratories&#44; the BD Phoenix&#8482; system offers an effective alternative&#46; It is noteworthy that identification was completed in only 8<span class="elsevierStyleHsp" style=""></span>h 22<span class="elsevierStyleHsp" style=""></span>min on average and with a concordance index of 95&#37;&#46;</p><span id="sec0005" class="elsevierStyleSection elsevierViewall"><span class="elsevierStyleSectionTitle" id="sect0025">Conflict of interest</span><p id="par0075" class="elsevierStylePara elsevierViewall">The authors declare that they have no conflicts of interest&#46;</p></span></span>"
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          "identificador" => "xack378342"
          "titulo" => "Acknowledgements"
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          "titulo" => "References"
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    "fechaRecibido" => "2017-05-28"
    "fechaAceptado" => "2017-10-15"
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            1 => "Final yeast identification"
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          "palabras" => array:3 [
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            1 => "Identificaci&#243;n definitiva de levaduras"
            2 => "<span class="elsevierStyleItalic">Candida</span> spp&#46;"
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        "resumen" => "<span id="abst0005" class="elsevierStyleSection elsevierViewall"><p id="spar0005" class="elsevierStyleSimplePara elsevierViewall">In patients with invasive fungal infections&#44; the accurate and rapid identification of the genus <span class="elsevierStyleItalic">Candida</span> is of utmost importance since antimycotic sensitivity is closely related to the species&#46; The aim of the present study was to compare the identification results of species of the genus <span class="elsevierStyleItalic">Candida</span> obtained by BD Phoenix&#8482; &#40;Becton Dickinson &#91;BD&#93;&#41; and Maldi-TOF MS &#40;Bruker Microflex LT Biotyper 3&#46;1&#41;&#46; A total of 192 isolates from the strain collection belonging to the Mycology Network of the Autonomous City of Buenos Aires&#44; Argentina&#44; were analyzed&#46; The observed concordance was 95&#37;&#46; Only 10 strains &#40;5&#37;&#41; were not correctly identified by the BD Phoenix&#8482; system&#46; The average identification time with the Yeast ID panels was 8<span class="elsevierStyleHsp" style=""></span>h 22<span class="elsevierStyleHsp" style=""></span>min&#46; The BD Phoenix&#8482; system proved to be a simple&#44; reliable and effective method for identifying the main species of the genus <span class="elsevierStyleItalic">Candida</span>&#46;</p></span>"
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      "es" => array:2 [
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        "resumen" => "<span id="abst0010" class="elsevierStyleSection elsevierViewall"><p id="spar0015" class="elsevierStyleSimplePara elsevierViewall">En pacientes con infecciones f&#250;ngicas invasoras&#44; la identificaci&#243;n certera y r&#225;pida de las especies del g&#233;nero <span class="elsevierStyleItalic">Candida</span> es de suma importancia&#44; ya que la sensibilidad a los antif&#250;ngicos est&#225; &#237;ntimamente relacionada con la especie&#46; El objetivo del presente estudio fue comparar los resultados de identificaci&#243;n de especies del g&#233;nero <span class="elsevierStyleItalic">Candida</span> obtenidos con el equipo comercial BD Phoenix<span class="elsevierStyleSup">TM</span> &#40;Becton Dickinson &#91;BD&#93;&#41; y con la t&#233;cnica de Maldi-TOF MS &#40;Bruker Microflex LT Biotyper 3&#46;1&#46;&#41; Se analizaron 192 aislamientos provenientes del cepario perteneciente a la Red de Micolog&#237;a de la Ciudad Aut&#243;noma de Buenos Aires&#44; Argentina&#46; La concordancia observada fue del 95&#37;&#46; Solo 10 cepas &#40;5&#37;&#41; no fueron identificadas correctamente por el sistema BD Phoenix<span class="elsevierStyleSup">TM</span>&#46; El tiempo promedio de identificaci&#243;n con los paneles Yeast ID fue de 8 h 22 min&#46; El sistema BD Phoenix<span class="elsevierStyleSup">TM</span> demostr&#243; ser un m&#233;todo simple&#44; confiable y efectivo para la identificaci&#243;n de las principales especies del g&#233;nero <span class="elsevierStyleItalic">Candida</span>&#46;</p></span>"
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            "apendice" => "<p id="par0090" class="elsevierStylePara elsevierViewall">Ana Maria Romeo &#40;Htal&#46; Penna&#41;&#44; Mariela Schijman &#40;Htal&#46; &#193;lvarez&#41;&#44; Claudia Garbasz &#40;Htal Pirovano&#41;&#44; Graciela Ponce &#40;IREP&#41;&#44; Silvana Cataldi &#40;Htal Durand&#41;&#44; Laura Dufranc &#40;Htal Zubizarreta&#41;&#44; Nora Franco &#40;Htal&#46; Pi&#241;ero&#41;&#44; M&#243;nica L&#243;pez &#40;Htal Ramos Mej&#237;a&#41;&#44; Ricardo Iachini &#40;I&#46; Pasteur&#41;&#44; Rosana Pereda &#40;Htal P&#46; Elizalde&#41;&#44; Alicia Arechavala &#40;Hospital Mu&#241;iz&#41;&#44; Analia Fernandez &#40;F&#46; Favaloro&#41;&#44; Silvia Relloso &#40;CEMIC&#41;&#44; Ivana Maldonado &#40;Htal Aleman&#41;&#44; Agustina Forastiero &#40;Htal Britanico&#41;&#44; Norma Fernandez &#40;Htal de Clinicas&#41;&#46;</p>"
            "etiqueta" => "Appendix A"
            "titulo" => "Integrantes de la Red de Micolog&#237;a-CABA"
            "identificador" => "sec0015"
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                  <table border="0" frame="\n
                  \t\t\t\t\tvoid\n
                  \t\t\t\t" class=""><thead title="thead"><tr title="table-row"><th class="td" title="table-head  " align="left" valign="top" scope="col" style="border-bottom: 2px solid black">Species&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</th><th class="td" title="table-head  " align="center" valign="top" scope="col" style="border-bottom: 2px solid black">BRUKER MALDI-TOF &#40;n&#41;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</th><th class="td" title="table-head  " align="center" valign="top" scope="col" style="border-bottom: 2px solid black">BD PHOENIX &#40;n&#41;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</th><th class="td" title="table-head  " align="center" valign="top" scope="col" style="border-bottom: 2px solid black">Concordance index &#40;&#37;&#41;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</th><th class="td" title="table-head  " align="center" valign="top" scope="col" style="border-bottom: 2px solid black">Discrepancies&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</th></tr></thead><tbody title="tbody"><tr title="table-row"><td class="td-with-role" title="table-entry ; entry_with_role_rowhead " align="left" valign="top"><span class="elsevierStyleItalic">C&#46; tropicalis</span>&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">39&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">38&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">97&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="left" valign="top">1 <span class="elsevierStyleItalic">C</span>&#46; <span class="elsevierStyleItalic">utilis</span>&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td></tr><tr title="table-row"><td class="td-with-role" title="table-entry ; entry_with_role_rowhead " align="left" valign="top"><span class="elsevierStyleItalic">C&#46; guilliermondii</span>&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">34&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">32&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">94&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="left" valign="top">1 <span class="elsevierStyleItalic">C&#46; melibiosica</span><br>1 <span class="elsevierStyleItalic">C&#46; parapsilosis</span>&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td></tr><tr title="table-row"><td class="td-with-role" title="table-entry ; entry_with_role_rowhead " align="left" valign="top"><span class="elsevierStyleItalic">C&#46; albicans</span>&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">31&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">31&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">100&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="" valign="top">&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td></tr><tr title="table-row"><td class="td-with-role" title="table-entry ; entry_with_role_rowhead " align="left" valign="top"><span class="elsevierStyleItalic">C&#46; parapsilosis</span> complex&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">29&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">28&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">96&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="left" valign="top">1 <span class="elsevierStyleItalic">C&#46; tropicalis</span>&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td></tr><tr title="table-row"><td class="td-with-role" title="table-entry ; entry_with_role_rowhead " align="left" valign="top"><span class="elsevierStyleItalic">C&#46; glabrata</span> complex&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">28&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">27&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">96&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="left" valign="top">1 <span class="elsevierStyleItalic">C&#46; parapsilosis</span>&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td></tr><tr title="table-row"><td class="td-with-role" title="table-entry ; entry_with_role_rowhead " align="left" valign="top"><span class="elsevierStyleItalic">C&#46; krusei</span>&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">23&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">22&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">95&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="left" valign="top">1 <span class="elsevierStyleItalic">C&#46; glabrata</span>&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td></tr><tr title="table-row"><td class="td-with-role" title="table-entry ; entry_with_role_rowhead " align="left" valign="top"><span class="elsevierStyleItalic">C&#46; dubliniensis</span>&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">4&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">2&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">50&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="left" valign="top">2 <span class="elsevierStyleItalic">C&#46; albicans</span>&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td></tr><tr title="table-row"><td class="td-with-role" title="table-entry ; entry_with_role_rowhead " align="left" valign="top"><span class="elsevierStyleItalic">C&#46; lusitaniae</span>&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">3&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">2&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">66&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="left" valign="top">1 <span class="elsevierStyleItalic">C</span>&#46; <span class="elsevierStyleItalic">melibiosica</span>&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td></tr><tr title="table-row"><td class="td-with-role" title="table-entry ; entry_with_role_rowhead " align="left" valign="top"><span class="elsevierStyleItalic">C&#46; lipolytica</span>&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">1&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">0&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">0&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="left" valign="top">1 <span class="elsevierStyleItalic">C&#46; rugosa</span>&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td></tr><tr title="table-row"><td class="td-with-role" title="table-entry ; entry_with_role_rowhead " align="left" valign="top">Total&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">192&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">182&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">95&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="left" valign="top">10&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td></tr></tbody></table>
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                  \t\t\t\t" class=""><thead title="thead"><tr title="table-row"><th class="td" title="table-head  " align="left" valign="top" scope="col" style="border-bottom: 2px solid black">Species BD Phoenix&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</th><th class="td" title="table-head  " align="center" valign="top" scope="col" style="border-bottom: 2px solid black">Confidence interval &#40;&#37;&#41;&nbsp;\t\t\t\t\t\t\n
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                  \t\t\t\t</td></tr><tr title="table-row"><td class="td-with-role" title="table-entry ; entry_with_role_rowhead " align="left" valign="top"><span class="elsevierStyleItalic">C&#46; guilliermondii</span> &#40;n<span class="elsevierStyleHsp" style=""></span>&#61;<span class="elsevierStyleHsp" style=""></span>32&#41;&nbsp;\t\t\t\t\t\t\n
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                  \t\t\t\t</td><td class="td" title="table-entry  " align="left" valign="top">7&#46;44 &#40;4&#46;43&#8211;15&#46;67&#41;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td></tr><tr title="table-row"><td class="td-with-role" title="table-entry ; entry_with_role_rowhead " align="left" valign="top"><span class="elsevierStyleItalic">C&#46; albicans</span> &#40;n<span class="elsevierStyleHsp" style=""></span>&#61;<span class="elsevierStyleHsp" style=""></span>31&#41;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">95&#8211;99&nbsp;\t\t\t\t\t\t\n
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                  \t\t\t\t</td></tr><tr title="table-row"><td class="td-with-role" title="table-entry ; entry_with_role_rowhead " align="left" valign="top"><span class="elsevierStyleItalic">C&#46; parapsilosis complex</span> &#40;n<span class="elsevierStyleHsp" style=""></span>&#61;<span class="elsevierStyleHsp" style=""></span>28&#41;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">99&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="left" valign="top">8&#46;21 &#40;4&#46;25&#8211;15&#46;66&#41;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td></tr><tr title="table-row"><td class="td-with-role" title="table-entry ; entry_with_role_rowhead " align="left" valign="top"><span class="elsevierStyleItalic">C&#46; glabrata complex</span> &#40;n<span class="elsevierStyleHsp" style=""></span>&#61;<span class="elsevierStyleHsp" style=""></span>27&#41;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">96&#8211;99&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="left" valign="top">10&#46;32 &#40;8&#46;12&#8211;15&#46;68&#41;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td></tr><tr title="table-row"><td class="td-with-role" title="table-entry ; entry_with_role_rowhead " align="left" valign="top"><span class="elsevierStyleItalic">C&#46; krusei</span> &#40;n<span class="elsevierStyleHsp" style=""></span>&#61;<span class="elsevierStyleHsp" style=""></span>22&#41;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">97&#8211;99&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="left" valign="top">15&#46;34 &#40;8&#46;42&#8211;15&#46;67&#41;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td></tr><tr title="table-row"><td class="td-with-role" title="table-entry ; entry_with_role_rowhead " align="left" valign="top"><span class="elsevierStyleItalic">C&#46; dubliniensis</span> &#40;n<span class="elsevierStyleHsp" style=""></span>&#61;<span class="elsevierStyleHsp" style=""></span>2&#41;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">99&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="left" valign="top">4&#46;48&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td></tr><tr title="table-row"><td class="td-with-role" title="table-entry ; entry_with_role_rowhead " align="left" valign="top"><span class="elsevierStyleItalic">C&#46; lusitaniae</span> &#40;n<span class="elsevierStyleHsp" style=""></span>&#61;<span class="elsevierStyleHsp" style=""></span>2&#41;&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="char" valign="top">99&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td><td class="td" title="table-entry  " align="left" valign="top">8&#46;43&nbsp;\t\t\t\t\t\t\n
                  \t\t\t\t</td></tr></tbody></table>
                  """
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ISSN: 03257541
Original language: English
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