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array:23 [ "pii" => "S1130140613001150" "issn" => "11301406" "doi" => "10.1016/j.riam.2013.09.018" "estado" => "S300" "fechaPublicacion" => "2014-01-01" "aid" => "285" "copyright" => "Revista Iberoamericana de Micología" "copyrightAnyo" => "2013" "documento" => "article" "crossmark" => 0 "subdocumento" => "ssu" "cita" => "Rev Iberoam Micol. 2014;31:16-21" "abierto" => array:3 [ "ES" => true "ES2" => true "LATM" => true ] "gratuito" => true "lecturas" => array:2 [ "total" => 2936 "formatos" => array:3 [ "EPUB" => 48 "HTML" => 2219 "PDF" => 669 ] ] "itemSiguiente" => array:18 [ "pii" => "S1130140613001113" "issn" => "11301406" "doi" => "10.1016/j.riam.2013.09.014" "estado" => "S300" "fechaPublicacion" => "2014-01-01" "aid" => "281" "copyright" => "Revista Iberoamericana de Micología" "documento" => "article" "crossmark" => 0 "subdocumento" => "ssu" "cita" => "Rev Iberoam Micol. 2014;31:22-9" "abierto" => array:3 [ "ES" => true "ES2" => true "LATM" => true ] "gratuito" => true "lecturas" => array:2 [ "total" => 3239 "formatos" => array:3 [ "EPUB" => 39 "HTML" => 2370 "PDF" => 830 ] ] "en" => array:12 [ "idiomaDefecto" => true "cabecera" => "<span class="elsevierStyleTextfn">Mycologic Forum</span>" "titulo" => "Highlights in pathogenic fungal biofilms" "tienePdf" => "en" "tieneTextoCompleto" => "en" "tieneResumen" => array:2 [ 0 => "en" 1 => "es" ] "paginas" => array:1 [ 0 => array:2 [ "paginaInicial" => "22" "paginaFinal" => "29" ] ] "titulosAlternativos" => array:1 [ "es" => array:1 [ "titulo" => "Aspectos sobresalientes en la formación de biopelículas por hongos patógenos" ] ] "contieneResumen" => array:2 [ "en" => true "es" => true ] "contieneTextoCompleto" => array:1 [ "en" => true ] "contienePdf" => array:1 [ "en" => true ] "autores" => array:1 [ 0 => array:2 [ "autoresLista" => "Janaina De Cássia Orlandi Sardi, Nayla De Souza Pitangui, Gabriela Rodríguez-Arellanes, Maria Lucia Taylor, Ana Maria Fusco-Almeida, Maria José Soares Mendes-Giannini" "autores" => array:6 [ 0 => array:2 [ "nombre" => "Janaina De Cássia Orlandi" "apellidos" => "Sardi" ] 1 => array:2 [ "nombre" => "Nayla De Souza" "apellidos" => "Pitangui" ] 2 => array:2 [ "nombre" => "Gabriela" "apellidos" => "Rodríguez-Arellanes" ] 3 => array:2 [ "nombre" => "Maria Lucia" "apellidos" => "Taylor" ] 4 => array:2 [ "nombre" => "Ana Maria" "apellidos" => "Fusco-Almeida" ] 5 => array:2 [ "nombre" => "Maria José Soares" "apellidos" => "Mendes-Giannini" ] ] ] ] ] "idiomaDefecto" => "en" "EPUB" => "https://multimedia.elsevier.es/PublicationsMultimediaV1/item/epub/S1130140613001113?idApp=UINPBA00004N" "url" => "/11301406/0000003100000001/v1_201402070026/S1130140613001113/v1_201402070026/en/main.assets" ] "itemAnterior" => array:18 [ "pii" => "S1130140613001101" "issn" => "11301406" "doi" => "10.1016/j.riam.2013.09.013" "estado" => "S300" "fechaPublicacion" => "2014-01-01" "aid" => "280" "copyright" => "Revista Iberoamericana de Micología" "documento" => "article" "crossmark" => 0 "subdocumento" => "ssu" "cita" => "Rev Iberoam Micol. 2014;31:11-5" "abierto" => array:3 [ "ES" => true "ES2" => true "LATM" => true ] "gratuito" => true "lecturas" => array:2 [ "total" => 2850 "formatos" => array:3 [ "EPUB" => 51 "HTML" => 2038 "PDF" => 761 ] ] "en" => array:13 [ "idiomaDefecto" => true "cabecera" => "<span class="elsevierStyleTextfn">Mycologic Forum</span>" "titulo" => "The importance of molecular analyses for understanding the genetic diversity of <span class="elsevierStyleItalic">Histoplasma capsulatum</span>: An overview" "tienePdf" => "en" "tieneTextoCompleto" => "en" "tieneResumen" => array:2 [ 0 => "en" 1 => "es" ] "paginas" => array:1 [ 0 => array:2 [ "paginaInicial" => "11" "paginaFinal" => "15" ] ] "titulosAlternativos" => array:1 [ "es" => array:1 [ "titulo" => "Importancia de los análisis moleculares en la comprensión de la diversidad genética de <span class="elsevierStyleItalic">Histoplasma capsulatum</span>: revisión" ] ] "contieneResumen" => array:2 [ "en" => true "es" => true ] "contieneTextoCompleto" => array:1 [ "en" => true ] "contienePdf" => array:1 [ "en" => true ] "resumenGrafico" => array:2 [ "original" => 0 "multimedia" => array:7 [ "identificador" => "fig0010" "etiqueta" => "Fig. 2" "tipo" => "MULTIMEDIAFIGURA" "mostrarFloat" => true "mostrarDisplay" => false "figura" => array:1 [ 0 => array:4 [ "imagen" => "gr2.jpeg" "Alto" => 1428 "Ancho" => 3210 "Tamanyo" => 331269 ] ] "descripcion" => array:1 [ "en" => "<p id="spar0040" class="elsevierStyleSimplePara elsevierViewall">Concatenated phylogenetic trees of Mexican <span class="elsevierStyleItalic">H. capsulatum</span> isolates using an MLS analysis. Trees were constructed with MEGA5 software considering the sequences, from 30 <span class="elsevierStyleItalic">H. capsulatum</span> samples, of the polymorphic loci: <span class="elsevierStyleItalic">arf</span>, <span class="elsevierStyleItalic">H-anti</span>, <span class="elsevierStyleItalic">ole1</span>, <span class="elsevierStyleItalic">tub1</span>, and the (GA)<span class="elsevierStyleInf">n</span> microsatellite. Phylogenetic analyses were conducted as follows: (1) the neighbor-joining (NJ) method using the Kimura two-parameter model<a class="elsevierStyleCrossRef" href="#bib0085"><span class="elsevierStyleSup">17</span></a>; and (2) the maximum parsimony (MP) method using the close-neighbor-interchange algorithm.<a class="elsevierStyleCrossRef" href="#bib0035"><span class="elsevierStyleSup">7</span></a> Data of parsimony were: MPT<span class="elsevierStyleHsp" style=""></span>=<span class="elsevierStyleHsp" style=""></span>99; LT<span class="elsevierStyleHsp" style=""></span>=<span class="elsevierStyleHsp" style=""></span>188; CI<span class="elsevierStyleHsp" style=""></span>=<span class="elsevierStyleHsp" style=""></span>0.584615; RI<span class="elsevierStyleHsp" style=""></span>=<span class="elsevierStyleHsp" style=""></span>0.881569. Trees were generated with 1000 replicates. Fourteen of the Mexican <span class="elsevierStyleItalic">H. capsulatum</span> isolates were previously classified by Kasuga et al.<a class="elsevierStyleCrossRef" href="#bib0075"><span class="elsevierStyleSup">15</span></a> as belonging to the LAm A clade. <span class="elsevierStyleItalic">Abbreviations</span>: Tb (<span class="elsevierStyleItalic">T. brasiliensis</span>), Ah (<span class="elsevierStyleItalic">A. hirsutus</span>), Ln (<span class="elsevierStyleItalic">L. nivalis</span>), Lc (<span class="elsevierStyleItalic">L. curasoae</span>), Mm (<span class="elsevierStyleItalic">M. megalophylla</span>), Dr (<span class="elsevierStyleItalic">Desmodus rotundus</span>), CS (Chiapas), GR (Guerrero), HG (Hidalgo), Mn (Michoacán), MS (Morelos), NL (Nuevo León), OC (Oaxaca), PL (Puebla), and USA (United States of America).</p>" ] ] ] "autores" => array:1 [ 0 => array:2 [ "autoresLista" => "Tania Vite-Garín, Daniel Alfonso Estrada-Bárcenas, Joaquín Cifuentes, Maria Lucia Taylor" "autores" => array:4 [ 0 => array:2 [ "nombre" => "Tania" "apellidos" => "Vite-Garín" ] 1 => array:2 [ "nombre" => "Daniel Alfonso" "apellidos" => "Estrada-Bárcenas" ] 2 => array:2 [ "nombre" => "Joaquín" "apellidos" => "Cifuentes" ] 3 => array:2 [ "nombre" => "Maria Lucia" "apellidos" => "Taylor" ] ] ] ] ] "idiomaDefecto" => "en" "EPUB" => "https://multimedia.elsevier.es/PublicationsMultimediaV1/item/epub/S1130140613001101?idApp=UINPBA00004N" "url" => "/11301406/0000003100000001/v1_201402070026/S1130140613001101/v1_201402070026/en/main.assets" ] "en" => array:20 [ "idiomaDefecto" => true "cabecera" => "<span class="elsevierStyleTextfn">Mycologic Forum</span>" "titulo" => "Genetic determinants of virulence – <span class="elsevierStyleItalic">Candida parapsilosis</span>" "tieneTextoCompleto" => true "paginas" => array:1 [ 0 => array:2 [ "paginaInicial" => "16" "paginaFinal" => "21" ] ] "autores" => array:1 [ 0 => array:4 [ "autoresLista" => "Kumara Singaravelu, Attila Gácser, Joshua D. Nosanchuk" "autores" => array:3 [ 0 => array:3 [ "nombre" => "Kumara" "apellidos" => "Singaravelu" "referencia" => array:1 [ 0 => array:2 [ "etiqueta" => "<span class="elsevierStyleSup">a</span>" "identificador" => "aff0005" ] ] ] 1 => array:3 [ "nombre" => "Attila" "apellidos" => "Gácser" "referencia" => array:1 [ 0 => array:2 [ "etiqueta" => "<span class="elsevierStyleSup">b</span>" "identificador" => "aff0010" ] ] ] 2 => array:4 [ "nombre" => "Joshua D." "apellidos" => "Nosanchuk" "email" => array:1 [ 0 => "josh.nosanchuk@einstein.yu.edu" ] "referencia" => array:2 [ 0 => array:2 [ "etiqueta" => "<span class="elsevierStyleSup">a</span>" "identificador" => "aff0005" ] 1 => array:2 [ "etiqueta" => "<span class="elsevierStyleSup">¿</span>" "identificador" => "cor0005" ] ] ] ] "afiliaciones" => array:2 [ 0 => array:3 [ "entidad" => "Departments of Medicine (Infectious Diseases) and Microbiology & Immunology, Albert Einstein College of Medicine, New York, NY, United States" "etiqueta" => "a" "identificador" => "aff0005" ] 1 => array:3 [ "entidad" => "Department of Microbiology, University of Szeged, Szeged, Hungary" "etiqueta" => "b" "identificador" => "aff0010" ] ] "correspondencia" => array:1 [ 0 => array:3 [ "identificador" => "cor0005" "etiqueta" => "⁎" "correspondencia" => "Corresponding author." ] ] ] ] "titulosAlternativos" => array:1 [ "es" => array:1 [ "titulo" => "Determinantes genéticos de la virulencia de <span class="elsevierStyleItalic">Candida parapsilosis</span>" ] ] "resumenGrafico" => array:2 [ "original" => 0 "multimedia" => array:7 [ "identificador" => "fig0010" "etiqueta" => "Fig. 2" "tipo" => "MULTIMEDIAFIGURA" "mostrarFloat" => true "mostrarDisplay" => false "figura" => array:1 [ 0 => array:4 [ "imagen" => "gr2.jpeg" "Alto" => 1119 "Ancho" => 1500 "Tamanyo" => 217196 ] ] "descripcion" => array:1 [ "en" => "<p id="spar0030" class="elsevierStyleSimplePara elsevierViewall">Immunofluorescence microscopy of <span class="elsevierStyleItalic">C. parapsilosis</span> and human macrophages. Red yeast are dead (photo credit to C. Papp and A. Gácser).</p>" ] ] ] "textoCompleto" => "<span class="elsevierStyleSections"><p id="par0005" class="elsevierStylePara elsevierViewall">Since the late 1970s, fungal infections have increasingly become a significant cause of morbidity and mortality especially among hospitalized and immunosuppressed patients.<a class="elsevierStyleCrossRef" href="#bib0345"><span class="elsevierStyleSup">69</span></a><span class="elsevierStyleItalic">Candida</span> species are the fourth most frequent causative agent of blood-stream infections, constituting 8–15% of hospital-acquired infections.<a class="elsevierStyleCrossRef" href="#bib0435"><span class="elsevierStyleSup">87</span></a> In the United States, <span class="elsevierStyleItalic">Candida albicans</span> is the most common pathogen followed by <span class="elsevierStyleItalic">Candida parapsilosis</span> or <span class="elsevierStyleItalic">Candida glabrata</span>, depending on the study. However, <span class="elsevierStyleItalic">C. parapsilosis</span> has become the leading causative agent in some institutions located in Europe, Asia and South America, and it is the <span class="elsevierStyleItalic">Candida</span> species with the largest increase in incidence since 1990.<a class="elsevierStyleCrossRefs" href="#bib0005"><span class="elsevierStyleSup">1,6,10–12,20,36,48,52,54,70,74,81,87</span></a> Of all candidal isolates, <span class="elsevierStyleItalic">C. parapsilosis</span> accounts for 15.5% in North America, 16.3% in Europe and 23.4% in Latin America.<a class="elsevierStyleCrossRef" href="#bib0405"><span class="elsevierStyleSup">81</span></a> In the US, it has been the third most common cause of neonatal sepsis.<a class="elsevierStyleCrossRef" href="#bib0330"><span class="elsevierStyleSup">66</span></a></p><p id="par0010" class="elsevierStylePara elsevierViewall">First isolated in 1928 from a stool specimen and thought to be non-pathogenic,<a class="elsevierStyleCrossRefs" href="#bib0010"><span class="elsevierStyleSup">2,86</span></a><span class="elsevierStyleItalic">C. parapsilosis</span> is now recognized as being fairly ubiquitous as it can be isolated from humans as a normal skin commensal as well as from domestic animals, insects, soil and marine environments.<a class="elsevierStyleCrossRefs" href="#bib0095"><span class="elsevierStyleSup">19,81,85</span></a> It is now especially well documented as a pathogen that arises from exogenous sources of infection in intravenous drug users and via medical instrumentation (e.g. catheters and hyperalimentation solutions).<a class="elsevierStyleCrossRefs" href="#bib0170"><span class="elsevierStyleSup">34,81</span></a> In particular, <span class="elsevierStyleItalic">C. parapsilosis</span> is recognized for its ability to cause invasive disease in patients without prior evidence of colonization via horizontal transmission through medical devices including catheters, parenteral nutrition solutions, and the hands of healthcare workers.<a class="elsevierStyleCrossRef" href="#bib0405"><span class="elsevierStyleSup">81</span></a> Invasive disease occurs more often in immunocompromised patients, such as individuals with AIDS, cancer and in patients undergoing gastrointestinal surgical procedures.<a class="elsevierStyleCrossRef" href="#bib0405"><span class="elsevierStyleSup">81</span></a> Other risk factors reported in studies include transplant receipt, antibiotic exposure, ophthalmic irrigating solutions and, especially, low birth weight in premature neonates.<a class="elsevierStyleCrossRefs" href="#bib0005"><span class="elsevierStyleSup">1,44,78,85,86</span></a> Clinical manifestations of <span class="elsevierStyleItalic">C. parapsilosis</span> include endocarditis, meningitis, peritonitis, arthritis, endophthalmitis, keratitis, otomycosis, onychomycosis, vulvovaginitis and urinary tract infections.<a class="elsevierStyleCrossRef" href="#bib0405"><span class="elsevierStyleSup">81</span></a> Mortality rates attributed to <span class="elsevierStyleItalic">C. parapsilosis</span> range from 4% to 45%, with an average mortality rate of 28.5%.<a class="elsevierStyleCrossRefs" href="#bib0030"><span class="elsevierStyleSup">6,11,28,81</span></a> Biofilm producing isolates are associated with outbreaks<a class="elsevierStyleCrossRef" href="#bib0190"><span class="elsevierStyleSup">38</span></a> and significantly higher mortality rates.<a class="elsevierStyleCrossRef" href="#bib0410"><span class="elsevierStyleSup">82</span></a></p><p id="par0015" class="elsevierStylePara elsevierViewall">Determinants of virulence for candidal disease include adhesion capability to host surface, ability to switch morphology between yeast and filamentous growth, biofilm formation and secretion of extracellular hydrolytic enzymes such as lipases, phospholipases or secreted aspartyl proteinases.<a class="elsevierStyleCrossRefs" href="#bib0255"><span class="elsevierStyleSup">51,83</span></a> Conflicting data exist regarding phospholipase activity, with some studies demonstrating their presence in clinical isolates and others their absence.<a class="elsevierStyleCrossRefs" href="#bib0070"><span class="elsevierStyleSup">14,16,26,47</span></a> Nevertheless, its role in virulence bears consideration. The development of gene disruption methods to produce mutants has been a pivotal achievement in our capacity to gain insights into the interactions of <span class="elsevierStyleItalic">C. parapsilosis</span> with hosts and host effector cells (<a class="elsevierStyleCrossRefs" href="#fig0005">Figs. 1 and 2</a>). This review will focus on the observations made on specific genes that have so far been characterized and shown to significantly influence these virulence traits.</p><elsevierMultimedia ident="fig0005"></elsevierMultimedia><elsevierMultimedia ident="fig0010"></elsevierMultimedia><span id="sec0005" class="elsevierStyleSection elsevierViewall"><span class="elsevierStyleSectionTitle" id="sect0025">Gene disruption</span><p id="par0020" class="elsevierStylePara elsevierViewall"><span class="elsevierStyleItalic">C. parapsilosis</span> has a diploid genome and does not have a described sexual cycle. Genetic analysis was initially limited by the availability of appropriate study tools. The first targeted gene disruption method was developed in 2007<a class="elsevierStyleCrossRef" href="#bib0115"><span class="elsevierStyleSup">23</span></a> based on previously established gene disruption protocols in <span class="elsevierStyleItalic">C. albicans</span>. The first targeted deletion in <span class="elsevierStyleItalic">C. parapsilosis</span> was the disruption of secreted lipases. This efficient gene deletion system was developed utilizing the repeated use of the dominant nourseoethricin marker (caSAT1) and subsequent deletion by FLP-mediated, site-specific recombination.<a class="elsevierStyleCrossRef" href="#bib0115"><span class="elsevierStyleSup">23</span></a> Applying this technique, the lipase locus in <span class="elsevierStyleItalic">C. parapsilosis</span> containing the adjacent lipase genes <span class="elsevierStyleItalic">CpLIP1</span>, <span class="elsevierStyleItalic">CpLIP2</span> were deleted and <span class="elsevierStyleItalic">CPLIP2</span> reconstructed providing an understanding of the role of lipase activity in virulence.<a class="elsevierStyleCrossRef" href="#bib0115"><span class="elsevierStyleSup">23</span></a></p></span><span id="sec0010" class="elsevierStyleSection elsevierViewall"><span class="elsevierStyleSectionTitle" id="sect0030">Lipases</span><p id="par0025" class="elsevierStylePara elsevierViewall">Microbial extracellular lipases are virulence factors in a broad range of bacteria and fungi, including <span class="elsevierStyleItalic">Candida</span> species.<a class="elsevierStyleCrossRef" href="#bib0405"><span class="elsevierStyleSup">81</span></a> So far, 10 lipase genes have been identified in <span class="elsevierStyleItalic">C. albicans</span>,<a class="elsevierStyleCrossRef" href="#bib0160"><span class="elsevierStyleSup">32</span></a> and disruption, such as the deletion of <span class="elsevierStyleItalic">LIP8</span>, can significantly affect virulence.<a class="elsevierStyleCrossRef" href="#bib0110"><span class="elsevierStyleSup">22</span></a> Only two lipase genes have been elucidated in <span class="elsevierStyleItalic">C. parapsilosis</span> – <span class="elsevierStyleItalic">CpLIP1</span> and <span class="elsevierStyleItalic">CpLIP2</span>, of which only the latter has been demonstrated to code for an active protein.<a class="elsevierStyleCrossRefs" href="#bib0035"><span class="elsevierStyleSup">7,53</span></a> Utilizing the described targeted gene deletion method, disruption of these lipase genes provides evidence that they play a role in pathogenesis (i) by the decreased tissue damage seen in the presence of lipase inhibitors, (ii) the decreased ability of <span class="elsevierStyleItalic">CpLIP1</span>-<span class="elsevierStyleItalic">CpLIP2</span> homozygous mutants to form complex biofilms, (iii) requirement for lipid-rich media, (iv) increased susceptibility to phagocytosis by macrophage-like cells, and (v) decreased virulence in comparison to wild-type <span class="elsevierStyleItalic">C. parapsilosis</span> yeast in infections of human oral epithelium or during murine intraperitoneal challenges.<a class="elsevierStyleCrossRefs" href="#bib0105"><span class="elsevierStyleSup">21,23</span></a> These observations hold significant clinical relevance since <span class="elsevierStyleItalic">C. parapsilosis</span> infections are particularly more commonly seen in patients receiving lipid-rich total parenteral nutrition and thus lipases may be a potential target for future antifungal agent development.<a class="elsevierStyleCrossRef" href="#bib0405"><span class="elsevierStyleSup">81</span></a></p></span><span id="sec0015" class="elsevierStyleSection elsevierViewall"><span class="elsevierStyleSectionTitle" id="sect0035">Secreted aspartyl proteinase (Sap)</span><p id="par0030" class="elsevierStylePara elsevierViewall">Secreted aspartyl proteinase (Sap) genes have been demonstrated in most pathogenic <span class="elsevierStyleItalic">Candida</span> including <span class="elsevierStyleItalic">C. albicans, Candida dubliniensis</span>, <span class="elsevierStyleItalic">Candida tropicalis</span> and <span class="elsevierStyleItalic">C. parapsilosis</span>.<a class="elsevierStyleCrossRefs" href="#bib0125"><span class="elsevierStyleSup">25,45,49,89</span></a> However, they are notably absent in many non-pathogenic yeasts (e.g. <span class="elsevierStyleItalic">Saccharomyces cerevisiae</span>) suggesting their possible role in virulence.<a class="elsevierStyleCrossRef" href="#bib0150"><span class="elsevierStyleSup">30</span></a> Sap isoenzymes have several functions such as (i) digestion of host proteins for provision of nitrogen sources, (ii) degradation of host cell surface structure and intracellular substances promoting tissue adhesion and invasion, and (iii) destruction of cells and molecules of the host immune system such as immunoglobulin G heavy chains, 2-macroglobulin, C3 protein, lactoglobulin, lactoperoxidase, collagen, and fibronectin<a class="elsevierStyleCrossRefs" href="#bib0355"><span class="elsevierStyleSup">71,77</span></a> thereby enabling evasion of antimicrobial activity.<a class="elsevierStyleCrossRef" href="#bib0155"><span class="elsevierStyleSup">31</span></a> For example, vulvovaginal and skin <span class="elsevierStyleItalic">C. albicans</span> isolates exhibit higher <span class="elsevierStyleItalic">in vitro</span> Sap activity compared to blood isolates, which possibly explains the earlier clearance of fungemia in comparison to sustained skin infection in infection models.<a class="elsevierStyleCrossRefs" href="#bib0040"><span class="elsevierStyleSup">8,14,15,88</span></a> To date, ten <span class="elsevierStyleItalic">SAP</span> genes (Sap1p-Sap10p) have been identified in <span class="elsevierStyleItalic">C. albicans</span>.<a class="elsevierStyleCrossRef" href="#bib0255"><span class="elsevierStyleSup">51</span></a> Their role in <span class="elsevierStyleItalic">C. parapsilosis</span> was unclear until the recent identification of 2 <span class="elsevierStyleItalic">SAPP1</span> genes: <span class="elsevierStyleItalic">SAPP1a</span> and <span class="elsevierStyleItalic">SAPP1b</span>.<a class="elsevierStyleCrossRef" href="#bib0150"><span class="elsevierStyleSup">30</span></a></p><p id="par0035" class="elsevierStylePara elsevierViewall">The <span class="elsevierStyleItalic">C. parapsilosis</span> genome database (<a id="intr0005" class="elsevierStyleInterRef" href="http://www.sanger.ac.uk/sequencing/candida/parapsilosis">www.sanger.ac.uk/sequencing/candida/parapsilosis</a>) was used to perform <span class="elsevierStyleItalic">in silico</span> analysis of the <span class="elsevierStyleItalic">SAPP1</span> genes. A 2871 base pair-duplicated upstream (<span class="elsevierStyleItalic">SAPP1a</span>) and downstream (<span class="elsevierStyleItalic">SAPP1b</span>) regions were defined in the genome.<a class="elsevierStyleCrossRef" href="#bib0150"><span class="elsevierStyleSup">30</span></a> All 4 alleles of the <span class="elsevierStyleItalic">SAPP1</span> gene were deleted from wild-type (WT) <span class="elsevierStyleItalic">C. parapsilosis</span>.<a class="elsevierStyleCrossRef" href="#bib0150"><span class="elsevierStyleSup">30</span></a> Separate homozygous <span class="elsevierStyleItalic">ΔΔsapp1a</span>, <span class="elsevierStyleItalic">ΔΔsapp1b</span> and a double-homozygous mutant <span class="elsevierStyleItalic">ΔΔsapp1a-ΔΔsapp1b</span> were generated.<a class="elsevierStyleCrossRef" href="#bib0150"><span class="elsevierStyleSup">30</span></a> Subsequent experiments revealed that in an inducer medium, Sapp1p production was reduced by about 50% in the <span class="elsevierStyleItalic">ΔΔsapp1a</span> and <span class="elsevierStyleItalic">ΔΔsapp1b</span> mutants, but a similar effect was not observed for the <span class="elsevierStyleItalic">SAPP2</span> gene. On the other hand, Sapp2p production was greater in the <span class="elsevierStyleItalic">ΔΔsapp1a-ΔΔsapp1b</span> mutant compared to wild-type yeast. This mutant was also hyper-susceptible to human serum, had decreased proteolytic activity, and decreased capacity to damage host-effector cells. Additionally, there was also greater phagocytosis and killing of the <span class="elsevierStyleItalic">ΔΔsapp1a-ΔΔsapp1b</span> yeasts by both human peripheral blood mononuclear cells (PBMCs) and PBMC-derived macrophages (PBMC-DM). After phagocytosis, the <span class="elsevierStyleItalic">ΔΔsapp1a-ΔΔsapp1b</span> yeasts induced more frequent phagolysosomal fusion, suggesting a role for Sapp1p in promoting intracellular survival.<a class="elsevierStyleCrossRef" href="#bib0150"><span class="elsevierStyleSup">30</span></a> Both the lipase and proteinase genes play a major role in biofilm formation which is the hallmark of both bacterial and fungal organisms involved in device related infection. While the basic characteristics for biofilm formation may be similar among biofilm producing organisms, unique differences exist as well.</p></span><span id="sec0020" class="elsevierStyleSection elsevierViewall"><span class="elsevierStyleSectionTitle" id="sect0040">Biofilm formation</span><p id="par0040" class="elsevierStylePara elsevierViewall">Colonization and infection due to <span class="elsevierStyleItalic">C. parapsilosis</span> are initiated by the organism's ability to adhere to host cells and tissues followed by the formation of biofilm on medical devices,<a class="elsevierStyleCrossRef" href="#bib0405"><span class="elsevierStyleSup">81</span></a> which is accomplished in part by cell surface hydrophobicity<a class="elsevierStyleCrossRef" href="#bib0335"><span class="elsevierStyleSup">67</span></a> and slime production.<a class="elsevierStyleCrossRef" href="#bib0020"><span class="elsevierStyleSup">4</span></a> Compared to <span class="elsevierStyleItalic">C. albicans</span>, <span class="elsevierStyleItalic">C. parapsilosis</span> has a 20.6% greater avidity to buccal epithelial cells and 143.7% increased adhesiveness to acrylic material,<a class="elsevierStyleCrossRef" href="#bib0335"><span class="elsevierStyleSup">67</span></a> although smaller studies have shown less significant differences.<a class="elsevierStyleCrossRef" href="#bib0405"><span class="elsevierStyleSup">81</span></a> After adherence, biofilm formation is initiated by the establishment of cellular layers via cell-to-cell contact.<a class="elsevierStyleCrossRef" href="#bib0375"><span class="elsevierStyleSup">75</span></a> In <span class="elsevierStyleItalic">C. albicans</span>, after adherence to tissues, the cells transform from yeast to hyphal forms, which appear to be a requirement for a structured biofilm.<a class="elsevierStyleCrossRefs" href="#bib0015"><span class="elsevierStyleSup">3,73</span></a> Once the mature biofilm is formed it is covered by an extracellular matrix that renders it less susceptible to antifungal medications. The transcriptional changes that occur during this process have been well studied in <span class="elsevierStyleItalic">C. albicans</span>, which reveal significant increases in the expression of genes that participate in glycolysis, amino acid and lipid metabolism.<a class="elsevierStyleCrossRefs" href="#bib0120"><span class="elsevierStyleSup">24,50</span></a><span class="elsevierStyleItalic">C. parapsilosis</span> and <span class="elsevierStyleItalic">C. albicans</span> differ in the nature of the biofilm formed. <span class="elsevierStyleItalic">C. parapsilosis</span> forms smaller and less complex structures,<a class="elsevierStyleCrossRefs" href="#bib0145"><span class="elsevierStyleSup">29,37</span></a> possibly because they do not produce hyphae. <span class="elsevierStyleItalic">C. parapsilosis</span> biofilms consist of yeast and pseudohyphal cells.<a class="elsevierStyleCrossRefs" href="#bib0085"><span class="elsevierStyleSup">17,23,37</span></a> Of note, pseudohyphal phenotypes can generate more biofilm and exhibit greater invasiveness into agar than strains in yeast forms.<a class="elsevierStyleCrossRef" href="#bib0210"><span class="elsevierStyleSup">42</span></a> Similarities exist as well between the two species: biofilms of both are inhibited by exogenous farnesol<a class="elsevierStyleCrossRefs" href="#bib0210"><span class="elsevierStyleSup">42,76</span></a> and Bcr1 (Biofilm and Cell wall Regulator 1) is a major regulator for both species.<a class="elsevierStyleCrossRefs" href="#bib0085"><span class="elsevierStyleSup">17,60,61</span></a></p><span id="sec0025" class="elsevierStyleSection elsevierViewall"><span class="elsevierStyleSectionTitle" id="sect0045">BCR1</span><p id="par0045" class="elsevierStylePara elsevierViewall"><span class="elsevierStyleItalic">In vivo</span> rat catheter models have been utilized to describe the role of <span class="elsevierStyleItalic">BCR1</span> in the development of biofilms.<a class="elsevierStyleCrossRef" href="#bib0090"><span class="elsevierStyleSup">18</span></a><span class="elsevierStyleItalic">BCR1</span> has been demonstrated to be a required fungal transcription factor for the formation of biofilms in both <span class="elsevierStyleItalic">C. albicans</span> and <span class="elsevierStyleItalic">C. parapsilosis</span>.<a class="elsevierStyleCrossRefs" href="#bib0085"><span class="elsevierStyleSup">17,60,61</span></a> Deletion of <span class="elsevierStyleItalic">BCR1</span> in either species impairs the ability for biofilm formation.<a class="elsevierStyleCrossRefs" href="#bib0085"><span class="elsevierStyleSup">17,61</span></a> In <span class="elsevierStyleItalic">C. albicans, BCR1</span> encodes genes targeting adhesins and cell-wall proteins (<span class="elsevierStyleItalic">ALS1, ALS3, HWP1</span> and <span class="elsevierStyleItalic">RBT5</span>) indicating its role in the early adhesive stages of biofilm formation.<a class="elsevierStyleCrossRefs" href="#bib0300"><span class="elsevierStyleSup">60–63</span></a> The effect of Bcr1 on biofilm formation is also thought to be in part secondary to its influence on the expression of CFEM (Common in Fungal Extracellular Membranes) family of proteins. CFEMs were initially identified in <span class="elsevierStyleItalic">Magnaportha grisea</span>. They are similar to epidermal growth factor (EGF) domains that are found in extracellular membrane regions and contain an eight-cysteine domain.<a class="elsevierStyleCrossRefs" href="#bib0195"><span class="elsevierStyleSup">39,40</span></a> The role of CFEM is likely to act as cell surface receptors (adhesins).<a class="elsevierStyleCrossRef" href="#bib0195"><span class="elsevierStyleSup">39</span></a> At least 5 CFEM members have been identified in <span class="elsevierStyleItalic">C. albicans</span>: <span class="elsevierStyleItalic">PGA7</span>, <span class="elsevierStyleItalic">PGA10</span>, <span class="elsevierStyleItalic">RBT5</span>, <span class="elsevierStyleItalic">CSA1</span> and <span class="elsevierStyleItalic">CSA2</span>. Three of them, <span class="elsevierStyleItalic">PGA10</span>, <span class="elsevierStyleItalic">RBT5</span> and <span class="elsevierStyleItalic">CSA1</span>, have been identified as vital for biofilm development.<a class="elsevierStyleCrossRef" href="#bib0340"><span class="elsevierStyleSup">68</span></a></p><p id="par0050" class="elsevierStylePara elsevierViewall"><span class="elsevierStyleItalic">C. parapsilosis</span> has seven CFEM members (<span class="elsevierStyleItalic">CFEM1-CFEM7</span>) including tandem duplicates of orthologs of <span class="elsevierStyleItalic">C. albicans RBT5</span>, <span class="elsevierStyleItalic">PGA10</span> and <span class="elsevierStyleItalic">CSA1</span>.<a class="elsevierStyleCrossRef" href="#bib0090"><span class="elsevierStyleSup">18</span></a><span class="elsevierStyleItalic">CFEM1-CFEM4</span> are in tandem and syntenic with <span class="elsevierStyleItalic">RBT5</span> and <span class="elsevierStyleItalic">PGA-7</span>, which in <span class="elsevierStyleItalic">C. parapsilosis</span> is postulated to have single gene duplications thereby forming <span class="elsevierStyleItalic">CFEM1/CFEM2</span> and <span class="elsevierStyleItalic">CFEM3/CFEM4</span>. <span class="elsevierStyleItalic">CFEM5-6</span> are orthologous with <span class="elsevierStyleItalic">CSA1</span>. An ortholog of <span class="elsevierStyleItalic">CFEM7</span> has not been identified in the <span class="elsevierStyleItalic">Candida</span> clade and may possibly be specific to <span class="elsevierStyleItalic">C. parapsilosis</span>.<a class="elsevierStyleCrossRef" href="#bib0090"><span class="elsevierStyleSup">18</span></a> Bcr1 exerts a different influence on the <span class="elsevierStyleItalic">CFEM</span> family in <span class="elsevierStyleItalic">C. parapsilosis</span>. In Bcr1d mutants, one member of each orthologous pair of <span class="elsevierStyleItalic">CFEM2</span>, <span class="elsevierStyleItalic">CFEM3</span> and <span class="elsevierStyleItalic">CFEM6</span> are down regulated, whereas expression of <span class="elsevierStyleItalic">CFEM1</span>, <span class="elsevierStyleItalic">CFEM4</span>, <span class="elsevierStyleItalic">CFEM5</span> and <span class="elsevierStyleItalic">CFEM7</span> is not affected.<a class="elsevierStyleCrossRef" href="#bib0090"><span class="elsevierStyleSup">18</span></a> Interestingly, <span class="elsevierStyleItalic">CFEM 2, CFEM3</span> or <span class="elsevierStyleItalic">CFEM6</span> do not appear to be a requirement for the formation of biofilms in <span class="elsevierStyleItalic">C. parapsilosis</span>. <span class="elsevierStyleItalic">CFEM2</span> and <span class="elsevierStyleItalic">CFEM3</span> are necessary and <span class="elsevierStyleItalic">CFEM6</span> is partially required for the heme utilization. Global transcriptional profiling of cells in an iron-depleted environment has shown the increased expression of 59 genes and decrease in 89 genes. Increased expression occurred in genes linked with cellular iron ion hemostasis and iron ion transport (<span class="elsevierStyleItalic">FTH1</span>, <span class="elsevierStyleItalic">FRE9</span> and <span class="elsevierStyleItalic">FRE10</span>). Decreased expression was seen in heme containing and iron sulfur proteins (<span class="elsevierStyleItalic">YHB1</span>, <span class="elsevierStyleItalic">SDH2</span> and <span class="elsevierStyleItalic">ISA1</span>) and all mitochondrial genes.<a class="elsevierStyleCrossRef" href="#bib0090"><span class="elsevierStyleSup">18</span></a></p></span><span id="sec0030" class="elsevierStyleSection elsevierViewall"><span class="elsevierStyleSectionTitle" id="sect0050">RBT1</span><p id="par0055" class="elsevierStylePara elsevierViewall">When <span class="elsevierStyleItalic">C. parapsilosis</span> produces biofilms there is an upregulation of the genes involved in the glycolysis, fatty acid metabolism and ergosterol synthesis.<a class="elsevierStyleCrossRef" href="#bib0375"><span class="elsevierStyleSup">75</span></a> These changes are similar to the ones observed when <span class="elsevierStyleItalic">C. albicans</span> cells are grown under hypoxic conditions.<a class="elsevierStyleCrossRef" href="#bib0395"><span class="elsevierStyleSup">79</span></a> Although <span class="elsevierStyleItalic">C. parapsilosis</span> does not produce true hyphae, the genome includes a member of the hyphae producing gene family, Hwp1.<a class="elsevierStyleCrossRef" href="#bib0380"><span class="elsevierStyleSup">76</span></a> One of the members in this family, the gene <span class="elsevierStyleItalic">RBT1</span> is induced during the production of biofilms and under hypoxia.<a class="elsevierStyleCrossRef" href="#bib0380"><span class="elsevierStyleSup">76</span></a> In <span class="elsevierStyleItalic">C. albicans, RBT1</span> is induced during filamentation and mutants have been demonstrated to have decreased virulence in rabbit and mouse cornea models.<a class="elsevierStyleCrossRefs" href="#bib0025"><span class="elsevierStyleSup">5,33</span></a> In <span class="elsevierStyleItalic">C. parapsilosis, RBT1</span> knockout isolates produce structurally much thinner biofilms than wild type while the heterozygous strains produce an intermediate thickness biofilm. This suggests that for full and appropriate biofilm development both of the <span class="elsevierStyleItalic">RBT1</span> alleles are required.<a class="elsevierStyleCrossRef" href="#bib0375"><span class="elsevierStyleSup">75</span></a></p></span></span><span id="sec0035" class="elsevierStyleSection elsevierViewall"><span class="elsevierStyleSectionTitle" id="sect0055">Lipid metabolism</span><p id="par0060" class="elsevierStylePara elsevierViewall">Fatty acid formation is vital for the functioning of organisms in all kingdoms. They are building blocks of cell membranes that are products of cellular biosynthesis and require a complex enzyme system.<a class="elsevierStyleCrossRef" href="#bib0290"><span class="elsevierStyleSup">58</span></a> So far, three major fatty acid synthesis systems have been identified. Eukaryotes and advanced prokaryotes (<span class="elsevierStyleItalic">Mycobacterium</span>, <span class="elsevierStyleItalic">Nocardia</span> and <span class="elsevierStyleItalic">Corynebacterium</span>) utilize Type I Fatty Acid synthesis system (<span class="elsevierStyleItalic">FAS1</span>), most bacteria utilize Type II, and parasites such as <span class="elsevierStyleItalic">Trypanosma</span> and <span class="elsevierStyleItalic">Leishmania</span> use <span class="elsevierStyleItalic">FAS3</span>.<a class="elsevierStyleCrossRef" href="#bib0215"><span class="elsevierStyleSup">43</span></a> While similar enzymes are found in the three <span class="elsevierStyleItalic">FAS</span> systems, the organization of the encoding genes may significantly vary.<a class="elsevierStyleCrossRef" href="#bib0290"><span class="elsevierStyleSup">58</span></a> In fungal organisms, production of essential fatty acids such as saturated and unsaturated fatty acids is critical for the generation and maintenance of cell membranes. Fatty acid synthase (<span class="elsevierStyleItalic">FAS</span>) and fatty acid desaturase (<span class="elsevierStyleItalic">OLE</span>) are important enzymes in this pathway.<a class="elsevierStyleCrossRef" href="#bib0275"><span class="elsevierStyleSup">55</span></a></p><span id="sec0040" class="elsevierStyleSection elsevierViewall"><span class="elsevierStyleSectionTitle" id="sect0060">Fatty acid synthase</span><p id="par0065" class="elsevierStylePara elsevierViewall">Fungal FAS enzymes initiate the formation of a 2,6-MD heterodacemeric complex including subunits that are encoded by <span class="elsevierStyleItalic">FAS1</span> and <span class="elsevierStyleItalic">FAS2</span>.<a class="elsevierStyleCrossRef" href="#bib0290"><span class="elsevierStyleSup">58</span></a> These enzymes are therefore critical for normal yeast growth, and disruption of even a single gene can significantly alter the organisms’ physiological phenotype and virulence. Fas2 inhibition has been demonstrated to attenuate pathogenicity of <span class="elsevierStyleItalic">Cryptococcus neoformans</span>, <span class="elsevierStyleItalic">C. parapsilosis</span> and <span class="elsevierStyleItalic">C. albicans</span>.<a class="elsevierStyleCrossRefs" href="#bib0045"><span class="elsevierStyleSup">9,90,91</span></a></p><p id="par0070" class="elsevierStylePara elsevierViewall"><span class="elsevierStyleItalic">C. parapsilosis</span> Fas2 (encoded by <span class="elsevierStyleItalic">CpFAS2</span>) heterozygous, homozygous and reconstituted Fas2 mutants have been generated.<a class="elsevierStyleCrossRef" href="#bib0290"><span class="elsevierStyleSup">58</span></a><span class="elsevierStyleItalic">CpFAS2</span> is required for growth in standard medium and gene expression was repressed in the presence of fatty acids.<a class="elsevierStyleCrossRef" href="#bib0290"><span class="elsevierStyleSup">58</span></a> Further, up-regulation of <span class="elsevierStyleItalic">CpFAS2</span> occurred when only glucose was made available as the carbon source. In comparison to a wild type yeast, <span class="elsevierStyleItalic">CpFAS2</span> disruptants had a significant decrease in the concentration of unsaturated fatty acids.<a class="elsevierStyleCrossRef" href="#bib0290"><span class="elsevierStyleSup">58</span></a><span class="elsevierStyleItalic">CpFAS2</span> genes are also necessary for normal biofilm formation. Microarray studies demonstrate that <span class="elsevierStyleItalic">CpFAS2</span> is upregulated during <span class="elsevierStyleItalic">in vitro</span> biofilm formation under hypoxic stress. <span class="elsevierStyleItalic">Δfas2</span> strains were shown to have decreased capability for biofilm formation on polystyrene and silicone surfaces.<a class="elsevierStyleCrossRef" href="#bib0290"><span class="elsevierStyleSup">58</span></a><span class="elsevierStyleItalic">CpFAS2</span> also appears to play a vital role in helping the organism survive the fungicidal activity of monocytes such as neutrophils and macrophages. Intracellular survival of <span class="elsevierStyleItalic">CpFAS2</span> disruptants was reduced by 40% when compared with wild type and heterozygous strains with a single <span class="elsevierStyleItalic">FAS2</span> gene.<a class="elsevierStyleCrossRef" href="#bib0290"><span class="elsevierStyleSup">58</span></a> This decrease in survival could likely be due to diminished membrane stability, thereby enhancing susceptibility to reactive oxygen species secreted by the macrophages. The <span class="elsevierStyleItalic">Δfas2</span> strains demonstrate a leaky phenotype when grown under stress conditions. This action, in combination with defective fatty acid production, alters intracellular viability and proliferation of strains with <span class="elsevierStyleItalic">CpFAS2</span> deletion.<a class="elsevierStyleCrossRef" href="#bib0290"><span class="elsevierStyleSup">58</span></a></p><p id="par0075" class="elsevierStylePara elsevierViewall">The Fas2 enzyme also appears to be critical for survival of <span class="elsevierStyleItalic">C. parapsilosis</span> in serum.<a class="elsevierStyleCrossRef" href="#bib0275"><span class="elsevierStyleSup">55</span></a> This is a vital process in fungal pathogenesis as exposure to serum influences virulence traits such as filamentation and biofilm formation.<a class="elsevierStyleCrossRef" href="#bib0295"><span class="elsevierStyleSup">59</span></a> Efficacy of antifungal drugs is decreased in serum, making the eradication of systemic infections difficult.<a class="elsevierStyleCrossRef" href="#bib0325"><span class="elsevierStyleSup">65</span></a><span class="elsevierStyleItalic">CpFAS2</span> disruptants are hypersensitive to serum and induce cell death.<a class="elsevierStyleCrossRef" href="#bib0275"><span class="elsevierStyleSup">55</span></a> Cell survival also appears to be influenced by the presence of glucose, which causes mitochondria-dependent cell death. Mechanisms of glucose toxicity in <span class="elsevierStyleItalic">Δfas2</span> strains are yet unclear, as glucose is usually a preferred carbon source for normal yeast growth. Toxicity may potentially be secondary to uncontrolled metabolism of glucose by the mutant cells, thereby creating an imbalance of cellular contents and subsequent triggering of a cell death response,<a class="elsevierStyleCrossRef" href="#bib0275"><span class="elsevierStyleSup">55</span></a> especially via energy-requiring apoptosis pathways, overproduction of ROS, nuclear fragmentation and cell shrinkage.<a class="elsevierStyleCrossRefs" href="#bib0135"><span class="elsevierStyleSup">27,84</span></a></p></span><span id="sec0045" class="elsevierStyleSection elsevierViewall"><span class="elsevierStyleSectionTitle" id="sect0065">Fatty acid desaturase (<span class="elsevierStyleItalic">OLE1</span>)</span><p id="par0080" class="elsevierStylePara elsevierViewall">In addition to glucotoxicity, elevated lipid content is thought to be detrimental to normal yeast growth.<a class="elsevierStyleCrossRef" href="#bib0285"><span class="elsevierStyleSup">57</span></a> In <span class="elsevierStyleItalic">C. parapsilosis</span>, exposure to high glucose induces formation of lipid droplets (LD); it is considered a possible mechanism through which yeast cells survive gluco- and lipo-toxicity.<a class="elsevierStyleCrossRef" href="#bib0285"><span class="elsevierStyleSup">57</span></a> Both the <span class="elsevierStyleItalic">CpFAS2</span> and fatty acid desaturase genes (<span class="elsevierStyleItalic">OLE1</span>) appear to play a role. Disruption of either of these genes inhibits LD formation from glucose.<a class="elsevierStyleCrossRef" href="#bib0285"><span class="elsevierStyleSup">57</span></a> Moreover, <span class="elsevierStyleItalic">OLE1</span> inhibition resulted in gluco/lipotoxicity of log phage yeast cells. While survival of wild type yeasts was decreased after 2 days of incubation, <span class="elsevierStyleItalic">Δole1</span> mutants died within a few hours of incubation, indicating its role in glucose detoxification.<a class="elsevierStyleCrossRef" href="#bib0285"><span class="elsevierStyleSup">57</span></a> In addition to glucose, <span class="elsevierStyleItalic">OLE1</span> deletion strains are also hypersusceptible to fructose, galactose, and mannose.</p></span><span id="sec0050" class="elsevierStyleSection elsevierViewall"><span class="elsevierStyleSectionTitle" id="sect0070">FIT2</span><p id="par0085" class="elsevierStylePara elsevierViewall">Lipid droplets (LDs) are cytoplasmic compartments that contain triacylglycerides (TAGs) that serve as fatty acid reservoirs<a class="elsevierStyleCrossRef" href="#bib0230"><span class="elsevierStyleSup">46</span></a> and lipid precursors of fatty acids (FA) and diacyl glycerol (DAG) for membrane lipids such as glycerophospholipids and sphingolipids.<a class="elsevierStyleCrossRefs" href="#bib0065"><span class="elsevierStyleSup">13,41</span></a> TAGs and steryl esters are major components of LDs and utilize fatty acyl CoA as a common substrate.<a class="elsevierStyleCrossRef" href="#bib0360"><span class="elsevierStyleSup">72</span></a> Akin to mammalian cells, LDs may significantly influence the functioning of pathogenic fungi. In <span class="elsevierStyleItalic">C. parapsilosis</span>, formation of LDs is necessary for normal cell growth and virulence.<a class="elsevierStyleCrossRef" href="#bib0280"><span class="elsevierStyleSup">56</span></a> A family of proteins involved in LD formation – fat storage-inducing transmembrane proteins 1 and 2 (<span class="elsevierStyleItalic">FIT1</span> and <span class="elsevierStyleItalic">FIT2</span>) – has recently been demonstrated in both humans and mice.<a class="elsevierStyleCrossRefs" href="#bib0175"><span class="elsevierStyleSup">35,56</span></a> In mammalian cells, <span class="elsevierStyleItalic">FIT2</span> orthologs enable compartmentalization of TAG in LDs and depleting <span class="elsevierStyleItalic">FIT2</span> transcripts in adipocytes decreased LD formation.<a class="elsevierStyleCrossRef" href="#bib0175"><span class="elsevierStyleSup">35</span></a> The <span class="elsevierStyleItalic">FIT2</span> proteins are primarily localized to the endoplasmic reticulum and are responsible for lipid partitioning rather than lipid synthesis.<a class="elsevierStyleCrossRef" href="#bib0175"><span class="elsevierStyleSup">35</span></a> Effects of <span class="elsevierStyleItalic">FIT2</span> on LD accumulation are therefore likely downstream in comparison to the DGA1 pathway.<a class="elsevierStyleCrossRefs" href="#bib0320"><span class="elsevierStyleSup">64,80</span></a></p><p id="par0090" class="elsevierStylePara elsevierViewall">In <span class="elsevierStyleItalic">C. parapsilosis</span>, disruption of <span class="elsevierStyleItalic">FIT2</span> impairs LD formation, alters the lipidome and attenuates virulence.<a class="elsevierStyleCrossRef" href="#bib0280"><span class="elsevierStyleSup">56</span></a> Both <span class="elsevierStyleItalic">in vitro</span> and <span class="elsevierStyleItalic">in vivo</span> studies demonstrated that heterozygous strains with deletion of one <span class="elsevierStyleItalic">FIT2</span> allele did not decrease TAG formation or LD size. However, deletion of both <span class="elsevierStyleItalic">FIT2</span> alleles significantly decreased TAG content (39%) and LD accumulation.<a class="elsevierStyleCrossRef" href="#bib0280"><span class="elsevierStyleSup">56</span></a> Alterations were also noted in other lipid species with <span class="elsevierStyleItalic">FIT2</span> deletion. While a 25% reduction was observed in fatty acids (FFA), unsaturated fatty oleic (4.63%) and linoleic acids (12.31%), elevations were noted in steryl esters (135%), diacylglycerols/sterols (96%) and phospholipids (112%), palmitic (1.5%) and stearic acids (15%).<a class="elsevierStyleCrossRef" href="#bib0280"><span class="elsevierStyleSup">56</span></a> However, <span class="elsevierStyleItalic">FIT2</span> deletion did not alter susceptibility to standard antifungal drugs.</p></span></span><span id="sec0055" class="elsevierStyleSection elsevierViewall"><span class="elsevierStyleSectionTitle" id="sect0075">Conclusions</span><p id="par0095" class="elsevierStylePara elsevierViewall">The epidemiology of microorganisms that impact human morbidity and mortality is constantly evolving. Globally, there is increased life expectancy, improved and more frequent access to the healthcare system, rising use of immunosuppressants, immunomodulators and biologics, and increased utilization of indwelling devices such as catheters and cardiovascular devices. Microbes that have the ability to evade the host immune system, produce biofilms and develop resistance to available treatment options have and will significantly impact morbidity and mortality. This is well exemplified by the globally increasing prevalence of <span class="elsevierStyleItalic">C. parapsilosis</span> infections. A significant work has been accomplished in identifying the genetic factors that determine the organism's virulence, and increased efforts are urgently needed to counter this global threat.</p></span><span id="sec0060" class="elsevierStyleSection elsevierViewall"><span class="elsevierStyleSectionTitle" id="sect0080">Conflict of interests</span><p id="par0100" class="elsevierStylePara elsevierViewall">The authors have no conflicts of interest.</p></span></span>" "textoCompletoSecciones" => array:1 [ "secciones" => array:13 [ 0 => array:2 [ "identificador" => "xres311208" "titulo" => "Abstract" ] 1 => array:2 [ "identificador" => "xpalclavsec294362" "titulo" => "Keywords" ] 2 => array:2 [ "identificador" => "xres311209" "titulo" => "Resumen" ] 3 => array:2 [ "identificador" => "xpalclavsec294361" "titulo" => "Palabras clave" ] 4 => array:2 [ "identificador" => "sec0005" "titulo" => "Gene disruption" ] 5 => array:2 [ "identificador" => "sec0010" "titulo" => "Lipases" ] 6 => array:2 [ "identificador" => "sec0015" "titulo" => "Secreted aspartyl proteinase (Sap)" ] 7 => array:3 [ "identificador" => "sec0020" "titulo" => "Biofilm formation" "secciones" => array:2 [ 0 => array:2 [ "identificador" => "sec0025" "titulo" => "BCR1" ] 1 => array:2 [ "identificador" => "sec0030" "titulo" => "RBT1" ] ] ] 8 => array:3 [ "identificador" => "sec0035" "titulo" => "Lipid metabolism" "secciones" => array:3 [ 0 => array:2 [ "identificador" => "sec0040" "titulo" => "Fatty acid synthase" ] 1 => array:2 [ "identificador" => "sec0045" "titulo" => "Fatty acid desaturase (OLE1)" ] 2 => array:2 [ "identificador" => "sec0050" "titulo" => "FIT2" ] ] ] 9 => array:2 [ "identificador" => "sec0055" "titulo" => "Conclusions" ] 10 => array:2 [ "identificador" => "sec0060" "titulo" => "Conflict of interests" ] 11 => array:2 [ "identificador" => "xack73815" "titulo" => "Acknowledgements" ] 12 => array:1 [ "titulo" => "References" ] ] ] "pdfFichero" => "main.pdf" "tienePdf" => true "fechaRecibido" => "2013-08-15" "fechaAceptado" => "2013-09-27" "PalabrasClave" => array:2 [ "en" => array:1 [ 0 => array:4 [ "clase" => "keyword" "titulo" => "Keywords" "identificador" => "xpalclavsec294362" "palabras" => array:8 [ 0 => "<span class="elsevierStyleItalic">Candida parapsilosis</span>" 1 => "Gene disruption" 2 => "Lipase" 3 => "Secreted aspartyl proteinases" 4 => "Phospholipase" 5 => "Fatty acid biosynthesis" 6 => "Biofilm" 7 => "Virulence" ] ] ] "es" => array:1 [ 0 => array:4 [ "clase" => "keyword" "titulo" => "Palabras clave" "identificador" => "xpalclavsec294361" "palabras" => array:8 [ 0 => "<span class="elsevierStyleItalic">Candida parapsilosis</span>" 1 => "Alteración génica" 2 => "Lipasa" 3 => "Secreción de aspartilproteinasas" 4 => "Fosfolipasa" 5 => "Biosíntesis de ácidos grasos" 6 => "Biopelícula" 7 => "Virulencia" ] ] ] ] "tieneResumen" => true "resumen" => array:2 [ "en" => array:2 [ "titulo" => "Abstract" "resumen" => "<p id="spar0005" class="elsevierStyleSimplePara elsevierViewall">The global epidemiology of fungal infections is changing. While overall, <span class="elsevierStyleItalic">Candida albicans</span> remains the most common pathogen; several institutions in Europe, Asia and South America have reported the rapid emergence to predominance of <span class="elsevierStyleItalic">Candida parapsilosis.</span> This mini-review examines the impact of gene deletions achieved in <span class="elsevierStyleItalic">C. parapsilosis</span> that have been published to date. The molecular approaches to gene disruption in <span class="elsevierStyleItalic">C. parapsilosis</span> and the molecularly characterized genes to date are reviewed. Similar to <span class="elsevierStyleItalic">C. albicans</span>, factors influencing virulence in <span class="elsevierStyleItalic">C. parapsilosis</span> include adherence, biofilm formation, lipid metabolism, and secretion of hydrolytic enzymes such as lipases, phospholipases and secreted aspartyl proteinases. Development of a targeted gene deletion method has enabled the identification of several unique aspects of <span class="elsevierStyleItalic">C. parapsilosis</span> genes that play a role in host–pathogen interactions – CpLIP1, CpLIP2, SAPP1a, SAPP1b, BCR1, RBT1, CpFAS2, OLE1, FIT-2.</p><p id="spar0010" class="elsevierStyleSimplePara elsevierViewall">This manuscript is part of the series of works presented at the “V International Workshop: Molecular genetic approaches to the study of human pathogenic fungi” (Oaxaca, Mexico, 2012).</p>" ] "es" => array:2 [ "titulo" => "Resumen" "resumen" => "<p id="spar0015" class="elsevierStyleSimplePara elsevierViewall">La epidemiología mundial de las infecciones fúngicas está cambiando. Aunque <span class="elsevierStyleItalic">Candida albicans</span> sigue siendo el patógeno más común, varios centros en Europa, Asia y Sudamérica han descrito la rápida emergencia de <span class="elsevierStyleItalic">Candida parapsilosis</span>, que ha terminado por predominar. La presente revisión examina la influencia de las deleciones genéticas producidas en <span class="elsevierStyleItalic">C. parapsilosis</span> que se han publicado hasta la fecha. Se revisan las estrategias moleculares de la alteración de genes de <span class="elsevierStyleItalic">C. parapsilosis</span> y los genes caracterizados molecularmente hasta la fecha. Al igual que en <span class="elsevierStyleItalic">C. albicans</span>, los factores que influyen en la virulencia de <span class="elsevierStyleItalic">C. parapsilosis</span> incluyen la adherencia, formación de biopelículas, el metabolismo de lípidos y la secreción de enzimas hidrolíticas, como lipasas, fosfolipasas y aspartilproteinasas. El desarrollo de un método de deleción génica dirigido ha permitido la identificación de varios aspectos exclusivos de los genes de <span class="elsevierStyleItalic">C. parapsilosis</span> que participan en las interacciones huésped-patógeno-CpLIP1, CpLIP2, SAPP1a, SAPP1b, BCR1, RBT1, CpFAS2, OLE1, FIT-2.</p><p id="spar0020" class="elsevierStyleSimplePara elsevierViewall">Este artículo forma parte de una serie de estudios presentados en el «V International Workshop: Molecular genetic approaches to the study of human pathogenic fungi» (Oaxaca, México, 2012).</p>" ] ] "multimedia" => array:2 [ 0 => array:7 [ "identificador" => "fig0005" "etiqueta" => "Fig. 1" "tipo" => "MULTIMEDIAFIGURA" "mostrarFloat" => true "mostrarDisplay" => false "figura" => array:1 [ 0 => array:4 [ "imagen" => "gr1.jpeg" "Alto" => 1126 "Ancho" => 1500 "Tamanyo" => 200449 ] ] "descripcion" => array:1 [ "en" => "<p id="spar0025" class="elsevierStyleSimplePara elsevierViewall">Scanning electron microscopy of <span class="elsevierStyleItalic">C. parapsilosis</span> interacting with murine macrophages (photo credit to T. Németh, T. Petkovits, and A. Gácser).</p>" ] ] 1 => array:7 [ "identificador" => "fig0010" "etiqueta" => "Fig. 2" "tipo" => "MULTIMEDIAFIGURA" "mostrarFloat" => true "mostrarDisplay" => false "figura" => array:1 [ 0 => array:4 [ "imagen" => "gr2.jpeg" "Alto" => 1119 "Ancho" => 1500 "Tamanyo" => 217196 ] ] "descripcion" => array:1 [ "en" => "<p id="spar0030" class="elsevierStyleSimplePara elsevierViewall">Immunofluorescence microscopy of <span class="elsevierStyleItalic">C. parapsilosis</span> and human macrophages. Red yeast are dead (photo credit to C. Papp and A. 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JN was supported in part by an award from the Irma T. Hirschl/Monique Weill-Caulier Trust.</p>" "vista" => "all" ] ] ] "idiomaDefecto" => "en" "url" => "/11301406/0000003100000001/v1_201402070026/S1130140613001150/v1_201402070026/en/main.assets" "Apartado" => array:4 [ "identificador" => "8080" "tipo" => "SECCION" "es" => array:2 [ "titulo" => "Fórum micológico" "idiomaDefecto" => true ] "idiomaDefecto" => "es" ] "PDF" => "https://static.elsevier.es/multimedia/11301406/0000003100000001/v1_201402070026/S1130140613001150/v1_201402070026/en/main.pdf?idApp=UINPBA00004N&text.app=https://www.elsevier.es/" "EPUB" => "https://multimedia.elsevier.es/PublicationsMultimediaV1/item/epub/S1130140613001150?idApp=UINPBA00004N" ]
Year/Month | Html | Total | |
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2023 June | 101 | 16 | 117 |
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2021 January | 30 | 27 | 57 |
2020 December | 27 | 17 | 44 |
2020 November | 41 | 16 | 57 |
2020 October | 23 | 12 | 35 |
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2020 August | 32 | 21 | 53 |
2020 July | 17 | 10 | 27 |
2020 June | 21 | 10 | 31 |
2020 May | 32 | 10 | 42 |
2020 April | 35 | 6 | 41 |
2020 March | 24 | 8 | 32 |
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2019 December | 23 | 9 | 32 |
2019 November | 19 | 15 | 34 |
2019 October | 35 | 4 | 39 |
2019 September | 26 | 4 | 30 |
2019 August | 15 | 18 | 33 |
2019 July | 19 | 19 | 38 |
2019 June | 49 | 21 | 70 |
2019 May | 113 | 45 | 158 |
2019 April | 62 | 40 | 102 |
2019 March | 13 | 7 | 20 |
2019 February | 20 | 6 | 26 |
2019 January | 10 | 7 | 17 |
2018 December | 19 | 9 | 28 |
2018 November | 32 | 9 | 41 |
2018 October | 23 | 19 | 42 |
2018 September | 34 | 4 | 38 |
2018 August | 24 | 4 | 28 |
2018 July | 17 | 6 | 23 |
2018 June | 28 | 6 | 34 |
2018 May | 22 | 9 | 31 |
2018 April | 27 | 2 | 29 |
2018 March | 11 | 1 | 12 |
2018 February | 14 | 1 | 15 |
2018 January | 18 | 3 | 21 |
2017 December | 10 | 2 | 12 |
2017 November | 18 | 2 | 20 |
2017 October | 24 | 1 | 25 |
2017 September | 12 | 7 | 19 |
2017 August | 14 | 5 | 19 |
2017 July | 16 | 2 | 18 |
2017 June | 78 | 12 | 90 |
2017 May | 25 | 6 | 31 |
2017 April | 30 | 2 | 32 |
2017 March | 27 | 44 | 71 |
2017 February | 25 | 1 | 26 |
2017 January | 29 | 3 | 32 |
2016 December | 34 | 7 | 41 |
2016 November | 40 | 7 | 47 |
2016 October | 53 | 7 | 60 |
2016 September | 53 | 7 | 60 |
2016 August | 33 | 1 | 34 |
2016 July | 28 | 4 | 32 |
2016 June | 59 | 21 | 80 |
2016 May | 34 | 12 | 46 |
2016 April | 20 | 6 | 26 |
2016 March | 30 | 10 | 40 |
2016 February | 22 | 10 | 32 |
2016 January | 27 | 14 | 41 |
2015 December | 26 | 8 | 34 |
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2015 October | 25 | 6 | 31 |
2015 September | 28 | 8 | 36 |
2015 August | 50 | 8 | 58 |
2015 July | 54 | 8 | 62 |
2015 June | 29 | 8 | 37 |
2015 May | 64 | 9 | 73 |
2015 April | 156 | 20 | 176 |
2015 March | 18 | 10 | 28 |
2015 February | 20 | 4 | 24 |
2015 January | 14 | 10 | 24 |
2014 December | 14 | 3 | 17 |
2014 November | 16 | 3 | 19 |
2014 October | 13 | 4 | 17 |
2014 September | 23 | 12 | 35 |
2014 August | 33 | 11 | 44 |
2014 July | 23 | 11 | 34 |
2014 June | 19 | 9 | 28 |
2014 May | 14 | 12 | 26 |
2014 April | 19 | 13 | 32 |
2014 March | 24 | 14 | 38 |
2014 February | 16 | 4 | 20 |